Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0424 |
Symbol | |
ID | 1182033 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 468737 |
End bp | 469321 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637391792 |
Product | methyltransferase, putative |
Protein accession | NP_790273 |
Protein GI | 28867654 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0742] N6-adenine-specific methylase |
TIGRFAM ID | [TIGR00095] RNA methyltransferase, RsmD family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCAATC CACGTCCGAA GGGCCATAAC GGCCTGGGTC AGCTTCGTAT CATCGGGGGA GAATGGGGCA GCCGCCGCCT GACCTTCCCC GACGCCCCCG GCCTGCGCCC GACGCCTGAT CGCGTGCGCG AAACATTGTT CAACTGGCTC GCGCCTTACA TCGCGGGCGC CAGGGTGCTG GACGTCTTCA CCGGCAGCGG CGCGCTGTTT TTCGAGGCGC TGTCGCGTGG CGCCAGCATG GGCCTGGCAC TGGACAGCAA CGCTGCCGCC ATCGCCAGCC TGCGCCAGAA CCTCAACGCC CTGAACTGCA CCAGCGGCCA GGTTGCCCAG ACCGACGCCC TGCGCCATCT GGAAACCGCC ACCGCATCGC CCTTCGACCT GGTTTTTCTC GACCCGCCCT TCCACCAGGG CCTGCTCGCT TCGGCCTGCA CCCTGCTGGA AACCCAGGGC TGGCTGGCCG AAACCGCCTG GATCTACACC GAAAGCGAAA CACCGCCCTC GACCACCGGC CTGCCGGGCA GTTGGCGATT GCATCGCGAG AAAAAAGCCG GACAGGTGTA TTACGCGTTG TGGCAGCGGG GGTAG
|
Protein sequence | MANPRPKGHN GLGQLRIIGG EWGSRRLTFP DAPGLRPTPD RVRETLFNWL APYIAGARVL DVFTGSGALF FEALSRGASM GLALDSNAAA IASLRQNLNA LNCTSGQVAQ TDALRHLETA TASPFDLVFL DPPFHQGLLA SACTLLETQG WLAETAWIYT ESETPPSTTG LPGSWRLHRE KKAGQVYYAL WQRG
|
| |