Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0423 |
Symbol | |
ID | 1182032 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 468196 |
End bp | 468474 |
Gene Length | 279 bp |
Protein Length | 92 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637391791 |
Product | proteic killer protein, putative |
Protein accession | NP_790272 |
Protein GI | 28867653 |
COG category | [R] General function prediction only |
COG ID | [COG3549] Plasmid maintenance system killer protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGATCGTCA GCTGGAGACA CAAAGGGCTC AAAGCTTTTT TCGAAACCGG CTCTAGCAGC GGCATCAGGG CGGATCACTC AAAACGCCTC GCGCACGTCC TGGCAGTACT GAATCGAGCG AGAACCCCTG CTAACGTCAA CATGCCCGGC TGGCGGCTTC ATCCCCTGAA AGGTGAACTG GAGGGTTTCT GGTCAATAAC TATCAATGCG AACTGGCGGA TTATTTTTCG TTTTTTCGAT ACAGATGTCG AACTGGTCGA CTACCTGGAT TACCACTGA
|
Protein sequence | MIVSWRHKGL KAFFETGSSS GIRADHSKRL AHVLAVLNRA RTPANVNMPG WRLHPLKGEL EGFWSITINA NWRIIFRFFD TDVELVDYLD YH
|
| |