Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0402 |
Symbol | |
ID | 1182011 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 445454 |
End bp | 446554 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637391770 |
Product | iron-sulfur cluster-binding protein |
Protein accession | NP_790251 |
Protein GI | 28867632 |
COG category | [C] Energy production and conversion |
COG ID | [COG0633] Ferredoxin [COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.501485 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCCAAA GTTTCCTCAG CCCGGTTACC ACCCAGACAT GGGCCAACGG GCGTCACCTG GTTCGGGTCG TCAAGGTGAT CCAGGAAACC TGGGATGTTC GCACCTTTTG CTTCATGGCC GACCAGCCGA TCATGTTCTT TTTCAAGCCC GGGCAGTTCG TGACCCTGGA GCTTGAGATC GACGGCGTGC CGATCATGCG CTCGTACACC ATCTCCAGCT CGCCGTCGGT GCCCTACAGT TTCTCGATTA CCGTCAAGCG CGTGCCAGGC GGCAAGGTCT CCAATTACCT GCATGACACG CTGAGTGAAG GGCAGGAGCT GGCGGTGCAT GGCCCGGTCG GGCTGTTCAA TGCCATCGAC TTCCCGAACC CGAAAATCCT GTACCTCAGT GGCGGTGTCG GTATCACGCC GGTGATGTCC ATGGCGCGCT GGTTCTACGA CACCAACGCC AATGTCGACA TGGTCTTCGT GCACAGCGCG CGCTCGCCCA AGGACATCAT CTACCACCGC GAGCTGGAGC ACATGGCCTC GCGGATCGAC AACTTCAGCC TGCATCTGGT CTGTGAAAAG CACGGGCTGG GCGAGCCGTG GGCCGGTTAT CGCGGCTACC TGAACCAGAA AATGCTCGAG CTCATGGCCC CGGATTTCAT GGACCGCGAA GTGTTCTGTT GCGGGCCGAC GCCGTACATG ACCGCGGTCA AGCGCCTGTT GCAGGAAAAC GGCTTCAACA TGGCCCAATA CCATGAGGAG TCGTTCGGCG CGACACCGCC CGAAGCCCGC GCCGATGCGG TCGAACAGGC TGAAATCGCT GCCGACGCAC CTGATGTCGA CGCCGCTGAC CTGCATCAGG TCGAGTTTAC CGACACCGGC AAGAGCATCC GCGTGGCCCC GGGCGAAACC GTCCACGCCG CCGCCGCCAA GCTCGGCCTG ATGATCCCCA AAGCCTGCGG TATGGGTATT TGCGGCACGT GCAAGGTCAT GAAGCTGAGC GGCGAAGTGG AAATGGAACA CAACGGCGGC ATCACCGACG AAGACGTTGC AGAGGGCTAC ATCCTGTCGT GCTGCAGCGT GCCGAAGGGC GATGTGCGGA TCGAGTATTG A
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Protein sequence | MSQSFLSPVT TQTWANGRHL VRVVKVIQET WDVRTFCFMA DQPIMFFFKP GQFVTLELEI DGVPIMRSYT ISSSPSVPYS FSITVKRVPG GKVSNYLHDT LSEGQELAVH GPVGLFNAID FPNPKILYLS GGVGITPVMS MARWFYDTNA NVDMVFVHSA RSPKDIIYHR ELEHMASRID NFSLHLVCEK HGLGEPWAGY RGYLNQKMLE LMAPDFMDRE VFCCGPTPYM TAVKRLLQEN GFNMAQYHEE SFGATPPEAR ADAVEQAEIA ADAPDVDAAD LHQVEFTDTG KSIRVAPGET VHAAAAKLGL MIPKACGMGI CGTCKVMKLS GEVEMEHNGG ITDEDVAEGY ILSCCSVPKG DVRIEY
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