Gene PSPTO_0402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0402 
Symbol 
ID1182011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp445454 
End bp446554 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content61% 
IMG OID637391770 
Productiron-sulfur cluster-binding protein 
Protein accessionNP_790251 
Protein GI28867632 
COG category[C] Energy production and conversion 
COG ID[COG0633] Ferredoxin
[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.501485 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCAAA GTTTCCTCAG CCCGGTTACC ACCCAGACAT GGGCCAACGG GCGTCACCTG 
GTTCGGGTCG TCAAGGTGAT CCAGGAAACC TGGGATGTTC GCACCTTTTG CTTCATGGCC
GACCAGCCGA TCATGTTCTT TTTCAAGCCC GGGCAGTTCG TGACCCTGGA GCTTGAGATC
GACGGCGTGC CGATCATGCG CTCGTACACC ATCTCCAGCT CGCCGTCGGT GCCCTACAGT
TTCTCGATTA CCGTCAAGCG CGTGCCAGGC GGCAAGGTCT CCAATTACCT GCATGACACG
CTGAGTGAAG GGCAGGAGCT GGCGGTGCAT GGCCCGGTCG GGCTGTTCAA TGCCATCGAC
TTCCCGAACC CGAAAATCCT GTACCTCAGT GGCGGTGTCG GTATCACGCC GGTGATGTCC
ATGGCGCGCT GGTTCTACGA CACCAACGCC AATGTCGACA TGGTCTTCGT GCACAGCGCG
CGCTCGCCCA AGGACATCAT CTACCACCGC GAGCTGGAGC ACATGGCCTC GCGGATCGAC
AACTTCAGCC TGCATCTGGT CTGTGAAAAG CACGGGCTGG GCGAGCCGTG GGCCGGTTAT
CGCGGCTACC TGAACCAGAA AATGCTCGAG CTCATGGCCC CGGATTTCAT GGACCGCGAA
GTGTTCTGTT GCGGGCCGAC GCCGTACATG ACCGCGGTCA AGCGCCTGTT GCAGGAAAAC
GGCTTCAACA TGGCCCAATA CCATGAGGAG TCGTTCGGCG CGACACCGCC CGAAGCCCGC
GCCGATGCGG TCGAACAGGC TGAAATCGCT GCCGACGCAC CTGATGTCGA CGCCGCTGAC
CTGCATCAGG TCGAGTTTAC CGACACCGGC AAGAGCATCC GCGTGGCCCC GGGCGAAACC
GTCCACGCCG CCGCCGCCAA GCTCGGCCTG ATGATCCCCA AAGCCTGCGG TATGGGTATT
TGCGGCACGT GCAAGGTCAT GAAGCTGAGC GGCGAAGTGG AAATGGAACA CAACGGCGGC
ATCACCGACG AAGACGTTGC AGAGGGCTAC ATCCTGTCGT GCTGCAGCGT GCCGAAGGGC
GATGTGCGGA TCGAGTATTG A
 
Protein sequence
MSQSFLSPVT TQTWANGRHL VRVVKVIQET WDVRTFCFMA DQPIMFFFKP GQFVTLELEI 
DGVPIMRSYT ISSSPSVPYS FSITVKRVPG GKVSNYLHDT LSEGQELAVH GPVGLFNAID
FPNPKILYLS GGVGITPVMS MARWFYDTNA NVDMVFVHSA RSPKDIIYHR ELEHMASRID
NFSLHLVCEK HGLGEPWAGY RGYLNQKMLE LMAPDFMDRE VFCCGPTPYM TAVKRLLQEN
GFNMAQYHEE SFGATPPEAR ADAVEQAEIA ADAPDVDAAD LHQVEFTDTG KSIRVAPGET
VHAAAAKLGL MIPKACGMGI CGTCKVMKLS GEVEMEHNGG ITDEDVAEGY ILSCCSVPKG
DVRIEY