Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0401 |
Symbol | |
ID | 1182010 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 443858 |
End bp | 445090 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637391769 |
Product | iron-sulfur cluster-binding protein, Rieske family |
Protein accession | NP_790250 |
Protein GI | 28867631 |
COG category | [P] Inorganic ion transport and metabolism [R] General function prediction only |
COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0142061 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGCAGA ATCGCGAGCG CACGTACTCG CTGCCGCAGC CTTTTTACAG TGATGACCGG CTGTTTGAAA TCGACATGCA GGAAATCTTT CATAAAGAAT GGCTGATCGC CGGAATGACC TGCGAGATCC CGACCAAGGG CAACTTCCTG ACCCTGCAGA TCGGCAAGAA CCCGATCCTC GTAGTGCGTG GCCCGGACGG TGCAGTCAAC GCGTTCCATA ATGTGTGCCG CCATCGCGGC TCGCGCCTGT GCACGGCCGA GAAAGGCAAG GTCGCCAAAC TGGTCTGTCA TTATCACCAG TGGACCTACG AACTGGACGG CCGCCTTCTT TACGCCGGTA CTGAAATGGG CGACGACTTC GACATGAAGC AGTTCGGCCT CAAGCCGGTG CACGTCAAGA CCGCAGGCGG TTACATCTTT ATCAGCCTGG CGGAGAATCC GCCTGCCATC GATGAGTTCC TGGCGACACT CAAGCACTAC ATGGAACCCT ACGACATGGA AAACACCAAG GTGGCGGTGC AAACCACCTT GATGGAGAAG GCCAACTGGA AGCTGGTGCT GGAGAACAAC CGCGAGTGCT ATCACTGCGG TGGCGCGCAC CCTGAATTGC TCAAGACCCT GCTGGAATGG GACGACGTCA CCGACCCGCG TGCCGACCAG GCCTTCAAGG ATCATGTCGC CGCGTCCGCC GCCGCGTGGG ACGCCGAGAA AATCCCTTAC GCCCACGCCA GTTTCGGCCT GCGTAACCGC ATCGTGCGCA TGCCGCTGCT CAAGGGCACC GTCTCGATGA CCATGGACGG AAAGGTCGGC TGTAAAAAAC TGATGGGCCG CATCCAGAAC CCGGAGCTGG GCTCGATGCG CATCCTGCAC CTGCCACACT CCTGGAACCA CTGCATGGGC GATCACATCA TCGTGTTCAC GGTGTGGCCG ATCAGTGCAC AGGAAACCAT GGTCTCCACC AAATGGATTG TCCACAAGGA TGCGGTAGAG GGTGTGGACT ACGACGTGGC GCGTATGCGT CAGGTCTGGG ACGCCACCAA CGACCAGGAC CGCCGTCTGG CCGAAGAAAA CCAGCGCGGC ATCAACTCCA CTGCCTATCA GCCCGGCCCG TACTCGAAAA CCTATGAGTT CGGCGTGGTC AATTTCATCG ACTGGTACAG CGCACGTATG CTGGAAAACC TCGGCGCAGA GCCCGCGCCT TATCTGAAAG GGGTGGCGGT GAATCACGAG TAG
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Protein sequence | MLQNRERTYS LPQPFYSDDR LFEIDMQEIF HKEWLIAGMT CEIPTKGNFL TLQIGKNPIL VVRGPDGAVN AFHNVCRHRG SRLCTAEKGK VAKLVCHYHQ WTYELDGRLL YAGTEMGDDF DMKQFGLKPV HVKTAGGYIF ISLAENPPAI DEFLATLKHY MEPYDMENTK VAVQTTLMEK ANWKLVLENN RECYHCGGAH PELLKTLLEW DDVTDPRADQ AFKDHVAASA AAWDAEKIPY AHASFGLRNR IVRMPLLKGT VSMTMDGKVG CKKLMGRIQN PELGSMRILH LPHSWNHCMG DHIIVFTVWP ISAQETMVST KWIVHKDAVE GVDYDVARMR QVWDATNDQD RRLAEENQRG INSTAYQPGP YSKTYEFGVV NFIDWYSARM LENLGAEPAP YLKGVAVNHE
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