Gene PSPTO_0397 details

Gene Information

• Locus tag: PSPTO_0397
• ID: 1182006
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 437235
• End bp: 439244
• Gene Length: 2010 bp
• Protein Length: 669 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 637391765
• Product: iron-sulfur cluster-binding protein
• Protein accession: NP_790246
• Protein GI: 28867627
• COG category: [C] Energy production and conversion
• COG ID: [COG0247] Fe-S oxidoreductase

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.138484
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCAGCTTA AAGCCCGCAC CTTAAAGCTC GCACCTGAGG TCAACGTGAT GCTAGACACC 
CTTCTCCCCA TCCTGCTGTT CAGCGCCCTG GCCCTCGCGG CGCTGGGTGC CTGGCGGCGG 
GTGAATATGT GGCGCATGGG CCGTGCTTCC AGAGTCGATC TGCTCGGCGG GCTGTTGGCC 
ATGCCCAAGC GCTACATGGT CGATCTGCAC CACGTGGTTG CCCGTGACAA ATACATCGCC 
AACACGCATG TGGCGACGGC AGGCGGCGCG GTCGCCTCGG TTGTGCTGGC GATTCTGGTG 
CATGGTTTCG GTCTGCATAA CCGTGTGCTG GGCTACGCGC TATTGCTGAT GACCGCAGTG 
ATGTTCGTCG GCGCAGTGTT TGTCTATCGC CGTCGCCTCA ACCCGCCTGC GCGTTTGTCC 
AAAGGACCGT GGATGCGCCT GCCGAAAAGC CTGATGGCGT TTTCCGCGAG CTTCTTTCTG 
GTCACGTTGC CGGTGGCCGG TATTCTTCCC GAACACTTCG GTGGCTGGGT GCTGGTCGCC 
ATTCTCGGGT TGGGTGTGTT GTGGGGCGTG AGCGAGCTGT TCTTCGGCAT GACCTGGGGC 
GGCCCGATGA AGCACGCTTT CGCCGGGGCC TTGCACCTGG CCTGGCATCG CCGTGCCGAG 
CGTTTTGGCG GTGGACGTTC CACCGGGTTG AAACCGCTTG ATCTGAATGA TCGGACTGCA 
CCGCTGGGTG TCGAGAAGCC CGCAGACTTC ACCTGGAACC AGTTGCTGGG TTTCGACGCC 
TGCGTGCAGT GCGGCAAATG TGAAGCAGCG TGCCCGGCGT TCGCGGCGGG TCAGCCGCTG 
AACCCCAAGA AGCTGATCCA GGACATGGTC GTCGGCCTTG CCGGCGGCAC CGACGCAAAA 
TTTGCCGGCA GCCCGTACCC ATCGCTTGAT GGCAAAGGCA AGCCACTGGG CGAGCATGGC 
GGCAACCCGC ATCAGCCCAT CGTCAACGGT CTGGTGGATG CCGAGACGCT GTGGTCCTGC 
ACCACCTGCC GCGCGTGTGT CGAAGAGTGC CCGATGATGA TCGAGCACGT TGATGCCATC 
GTCGACATGC GCCGCTACCT GACCCTGGAA AAAGGCGCAA CGCCGAACAA AGGCGCGCAA 
GTGCTGGATA ACCTGATCGC CACCGACAAC CCCGGCGGCT TCGCACCGGG CGGACGAATG 
AACTGGGCCG CCGACCTGAA CCTTGATCTG CTCAGCGTGA GGAAGACAGT AGACGTGCTG 
TTCTGGGTTG GCGATGGCGC GTTTGACATG CGCAATCAAC GCACGCTGCG TGCGTTCGTC 
AAAGTCCTCA AGGCGGCCAG GGTGGATTTC GCCGTGCTGG GCCTTGAAGA GCGCGACAGC 
GGTGACGTGG CTCGGCGTCT GGGCGATGAG GCGACTTTTC AGACGCTCGC CCGCCGCAAC 
ATTCAGACCC TGGCCCAGTA CCACTTCAAA CGCATCGTGA CCTGCGACCC GCACAGCTTT 
CATGTGCTGA AAAACGAATA CGGCGCATTG GGCGGTGACT ATCAGGTGCA GCATCACAGC 
ACCTTCATGG CCGAACTGGT ACAGCGCGGC ACCCTGAATC TGAGCCAGCA CAAAGGCGCC 
AGCGTCACCT ATCACGACCC GTGTTACCTG GGCCGCTACA ACGGCGAATA CGAAGCACCG 
CGTGAAGTGC TGCGCGCGCT GGGTATCGAA GTCAGGGAGA TGCAGCGCTC CGGCTTTCGT 
TCTCGCTGCT GCGGTGGTGG GGGCGGCGCA CCGATTACGG ACATCCCCGG CAAACAGCGG 
ATTCCCGACA TGCGTATGGA CGACATTCGT CAAACCGCTG CCGAGGTGGT GGCGGTGGGT 
TGTCCACAAT GCACGGCCAT GCTTGAAGGT GTGGTTGAAC CGCGCCCGCT GATCAAGGAT 
ATCGCCGAGC TGGTGGCTGA TGCGCTGGTT GAAGAAGTTA TCCCCAGCCC GTCTGTTGCC 
GCCAAACGTG AACCCGCGGA GGTGCACTGA 

 

Protein sequence

MQLKARTLKL APEVNVMLDT LLPILLFSAL ALAALGAWRR VNMWRMGRAS RVDLLGGLLA 
MPKRYMVDLH HVVARDKYIA NTHVATAGGA VASVVLAILV HGFGLHNRVL GYALLLMTAV 
MFVGAVFVYR RRLNPPARLS KGPWMRLPKS LMAFSASFFL VTLPVAGILP EHFGGWVLVA 
ILGLGVLWGV SELFFGMTWG GPMKHAFAGA LHLAWHRRAE RFGGGRSTGL KPLDLNDRTA 
PLGVEKPADF TWNQLLGFDA CVQCGKCEAA CPAFAAGQPL NPKKLIQDMV VGLAGGTDAK 
FAGSPYPSLD GKGKPLGEHG GNPHQPIVNG LVDAETLWSC TTCRACVEEC PMMIEHVDAI 
VDMRRYLTLE KGATPNKGAQ VLDNLIATDN PGGFAPGGRM NWAADLNLDL LSVRKTVDVL 
FWVGDGAFDM RNQRTLRAFV KVLKAARVDF AVLGLEERDS GDVARRLGDE ATFQTLARRN 
IQTLAQYHFK RIVTCDPHSF HVLKNEYGAL GGDYQVQHHS TFMAELVQRG TLNLSQHKGA 
SVTYHDPCYL GRYNGEYEAP REVLRALGIE VREMQRSGFR SRCCGGGGGA PITDIPGKQR 
IPDMRMDDIR QTAAEVVAVG CPQCTAMLEG VVEPRPLIKD IAELVADALV EEVIPSPSVA 
AKREPAEVH