Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0377 |
Symbol | |
ID | 1181986 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 417062 |
End bp | 418288 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637391745 |
Product | metal ion efflux outer membrane protein, putative |
Protein accession | NP_790226 |
Protein GI | 28867607 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGAGTCG GCGCATTTTG CCTGTTGCTG TTACCGCTTG TTGCCCCCGG TGTGGCAAGT GCCCAGGGCA TCAGCCTGCC GCAGGCACTG GAAGCGGCCT TTGCCCACAA CCCTGAGCTT GCAGCCGCGC AGTGGGAAAT CGGTGTTGCA GAGGGTGATC GCCAGCAGGC CGGACTGATC CCCAACCCGG TGCTGTCGTG GGAAGTGGAA GACACCCGCC GCGACACCAG CACCACCACC GTGATGCTCA GCCAGGCGCT GGAACTGGGC GGCAAACGCG GTGCGCGTAT CGAAGCGGCC GGCAAGGGTC AGGACGCTGC CAGACTGGAG CTTGAACAGC GTGGCAACGA ACTGCGCGCC GACGTGGTTC AGGCGTTTTA TGCCGCAGCG CGGGCGCAGG CAGGTCTGGA GCTGGCGCGT CAGTCCAGGG CACTGGCCGA GCGCGGCCTG CATGTCGCCG AAGGACGTGT GCGGGCGGGC AAGGTCTCGC CGGTCGAAGC CACCCGCGCA CAAGTGCAGC TGGCAGAAAC CGACTTGCTG GTACGCCGTG CCGAAACCCT GAAAATCAAC AGCAACCGTG AACTGGCACG CGCCACCGGC TCGCCGACCG CCTCTTTCGA GCGCCTGGAT TACACCGACC TGTCGCCGGG CAAATCGCCA TCGAGTGCAA GGATGATGAC CGCCCTCAAT CAGTCCGCCG AGCTGCGCCT GGCCCAGACC CGGATCGAAC AGCGCGAAGC CGCACTCGGC TCGGAACGCG CCAAGCGCAT TCCCGACCTG ACCGTCAGCG TCGGCAGCCA GTACAGCCGC GAAGAGCGCG AGCGGGTCAA CGTTGTGGGG CTGTCGATGC CGCTGCCGTT GTTCGATCGC AATCAGGGCA ATGTGCTCGC CGCCTCACGC CGTGCCGACC AGTCCCGTGA CCTGCGCAAT GCCGTCGAAC TCAAGCTGCG CACCCAGACG CAATCAGCTC TCGATCAGTG GAGCACCGCG GCACAGGAAG TCGAGTCATT CAACAAGGTC ATCCTGCCTG CCGCGCAAAG CGCCGTTGAC ACCGCAACCC GTGGTTTCGA GATGGGCAAG TTCGGCTTCC TCGAAGTGCT GGATGCGCAA CGCACATTGA TTTCGGCCCG TAGCCAGTAC CTGGAGTCAC TGGCGACGGC CACCGAAGCG CGGGTCGCCA TCGAGCGTAT CCACGGTGAT CTCAACCGGT TCAGCTTCAC CCCCTGA
|
Protein sequence | MRVGAFCLLL LPLVAPGVAS AQGISLPQAL EAAFAHNPEL AAAQWEIGVA EGDRQQAGLI PNPVLSWEVE DTRRDTSTTT VMLSQALELG GKRGARIEAA GKGQDAARLE LEQRGNELRA DVVQAFYAAA RAQAGLELAR QSRALAERGL HVAEGRVRAG KVSPVEATRA QVQLAETDLL VRRAETLKIN SNRELARATG SPTASFERLD YTDLSPGKSP SSARMMTALN QSAELRLAQT RIEQREAALG SERAKRIPDL TVSVGSQYSR EERERVNVVG LSMPLPLFDR NQGNVLAASR RADQSRDLRN AVELKLRTQT QSALDQWSTA AQEVESFNKV ILPAAQSAVD TATRGFEMGK FGFLEVLDAQ RTLISARSQY LESLATATEA RVAIERIHGD LNRFSFTP
|
| |