| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0376 |
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| Symbol | |
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| ID | 1181985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 415726 |
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| End bp | 416994 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637391744 |
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| Product | cation efflux family protein |
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| Protein accession | NP_790225 |
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| Protein GI | 28867606 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR00999] Membrane Fusion Protein cluster 2 (function with RND porters)
[TIGR01730] RND family efflux transporter, MFP subunit |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAACA AACGAAGCAT TGCCATCGCA CTGGCGGTGG TGGTCATCAT TGGTCTGGGC
AGTCTGACGG TGAGCCAGCA GATGCTGCCC TTCGCCGCTG AAACCGACGC CTCGGACAAA
AAGCCTGCAG ATAAGGAGCA TGGCCATGAG TCAGAGGACG CCCACGGCGA CGATGACCAC
GCCAGTGACC CGAAAAAGGC GAGTGCCGCA GCCGCAGAAC AGCCCCATGA AGAGGAGGAA
GAAGGCCACA TCGAGCTGAC CGCCGAGCAG ATCAAGACGG CCGGCATCGA ACTGGCCACC
GCCGAGCCTC GGCAAATGAG CACCACCGTG ACCTTCCCCG GTGAAATCCG CTTCGATGAA
GACCGCACCG CGCATGTGGT GCCTCGGGTC AGCGGCGTGG TCGAGTCGGT CAAGGTCGAT
CTGGGTCAGG CTGTGAAAAA GGGCCAGGTG CTGGCGGTCA TCGCCAGCCA GCAGATCTCC
GACCAACGCA GCGAACTGAA TGCCGCGCAG CGACGTCAGG AACTGGCGCG CCTGACCCTG
CAACGCGAGA AGAAACTCTG GGAAGACAAG ATCTCCGCCG AGCAGGATTA CCTGCAAGCG
CGCCAGGACT TTCAGGAAGC CGACATCAAC CTCGCCAATG CCCGGCAGAA GATCAGCGCC
ATCGGTGCCA GCCTCAGCCC CTCCGCAGGC AATCGCTACG AGCTGATCGC GCCCTTTGAC
TCGATGGTCG TGGAGAAACA CCTCGGCATC GGCGAGATGG TCAACGAAGC GAGCAACGCG
TTCACCCTGT CGGATCTGTC CCGCGTGTGG GCGACCTTCG GTGTGGCGCC AAGGGATCTG
GACAAGGTGG TGGTCGGTCG CCCGGTCATC GTCAGCGCGC CTGATCTGAA TGCGCGGGTC
GAAGGCAAGA TCGGTTACGT CGGCAGCTTG CTGGGCGAAC AGACCCGCGC CGCCGCCGTA
CGCGTCACAC TTGCCAACCC GCAGGGCGCA TGGCGTCCCG GCCTGTTCGT GTCGGTCGAA
GTGGCTGCCG AGCAGTCCAG TGTCGCGGTC AGCGTGCCCG ACTCCGCAAT CCAGTCAATT
GAAGAAAAAC CGTCGGTGTT CGTGCGTAAC GCTGAAGGTT TTCAGCTGAC GCCGGTGACG
CTCGGCCGCC GCGATGGCGG TCATGTGGAA ATCGTCAAAG GCCTGGCCGC CGGCACGCAA
GTGGCCGCCG CTGGCAGCTT CATCCTCAAG TCGGAGCTGG GCAAAGGCTC CGCCGAGCAC
GCCCATTGA
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| Protein sequence | MNNKRSIAIA LAVVVIIGLG SLTVSQQMLP FAAETDASDK KPADKEHGHE SEDAHGDDDH
ASDPKKASAA AAEQPHEEEE EGHIELTAEQ IKTAGIELAT AEPRQMSTTV TFPGEIRFDE
DRTAHVVPRV SGVVESVKVD LGQAVKKGQV LAVIASQQIS DQRSELNAAQ RRQELARLTL
QREKKLWEDK ISAEQDYLQA RQDFQEADIN LANARQKISA IGASLSPSAG NRYELIAPFD
SMVVEKHLGI GEMVNEASNA FTLSDLSRVW ATFGVAPRDL DKVVVGRPVI VSAPDLNARV
EGKIGYVGSL LGEQTRAAAV RVTLANPQGA WRPGLFVSVE VAAEQSSVAV SVPDSAIQSI
EEKPSVFVRN AEGFQLTPVT LGRRDGGHVE IVKGLAAGTQ VAAAGSFILK SELGKGSAEH
AH
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