Gene PSPTO_0363 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0363 
SymbolpolS 
ID1181972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp397298 
End bp398071 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content60% 
IMG OID637391731 
Productsorbitol dehydrogenase 
Protein accessionNP_790212 
Protein GI28867593 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGAC TTGAAGGTAA AAGCGCGCTG ATCACCGGAT CGGCGCGGGG CATTGGGCGG 
TCTTTTGCGC AGGCTTACAT CCGCGAAGGG GCCAGCGTGG CCATTGCCGA TATCAATCTT
GAGCGTGCAC AAGCCACAGC AATCGAACTG GGGCCGAACG CTTATGCGGT CAGCATGGAC
GTGACGGATC AGGCGTCCAT CGATCAGGCC ATCGCCGCCG TGGTGGCGCA GACCGGCAAG
CTGGATATCC TGATCAATAA CGCGGCGCTG TTCGATCTTG CACCGATTGT GGATATCACG
CGTGACAGCT ACGAGCGGCT GTTTTCGATC AATGTCGCGG GCACGCTGTT CACCTTGCAG
GCAGCGGCAA AGCAGATGAT TGCTCAGGGC CACGGCGGCA AGATCATCAA CATGGCCAGC
CAGGCCGGCC GGCGTGGTGA AGCGTTGGTG GCGGTGTATT GCGCGACCAA GGCTGCGGTG
ATCAGCCTGA CGCAATCGGC CGGGCTGGAC CTCATCAGGC ACGGTATCAA TGTGAATGCC
ATCGCCCCTG GCGTAGTCGA TGGCGAGCAC TGGGATGGCG TGGACGCGAT GTTCGCCCGC
TATGAAAACC GCCCGCGGGG CGAGAAAAAG AAACTGGTCG GCGAGCAGGT ACCCTACGGA
CGCATGGGCA CCGCGGATGA CCTGACCGGC ATGGCTATCT TTCTCGCCTC GACCGACAGT
GAATACGTGG TGGCGCAGAC TTACAACGTC GATGGTGGCA ACTGGATGAG CTGA
 
Protein sequence
MKRLEGKSAL ITGSARGIGR SFAQAYIREG ASVAIADINL ERAQATAIEL GPNAYAVSMD 
VTDQASIDQA IAAVVAQTGK LDILINNAAL FDLAPIVDIT RDSYERLFSI NVAGTLFTLQ
AAAKQMIAQG HGGKIINMAS QAGRRGEALV AVYCATKAAV ISLTQSAGLD LIRHGINVNA
IAPGVVDGEH WDGVDAMFAR YENRPRGEKK KLVGEQVPYG RMGTADDLTG MAIFLASTDS
EYVVAQTYNV DGGNWMS