Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0363 |
Symbol | polS |
ID | 1181972 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 397298 |
End bp | 398071 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637391731 |
Product | sorbitol dehydrogenase |
Protein accession | NP_790212 |
Protein GI | 28867593 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACGAC TTGAAGGTAA AAGCGCGCTG ATCACCGGAT CGGCGCGGGG CATTGGGCGG TCTTTTGCGC AGGCTTACAT CCGCGAAGGG GCCAGCGTGG CCATTGCCGA TATCAATCTT GAGCGTGCAC AAGCCACAGC AATCGAACTG GGGCCGAACG CTTATGCGGT CAGCATGGAC GTGACGGATC AGGCGTCCAT CGATCAGGCC ATCGCCGCCG TGGTGGCGCA GACCGGCAAG CTGGATATCC TGATCAATAA CGCGGCGCTG TTCGATCTTG CACCGATTGT GGATATCACG CGTGACAGCT ACGAGCGGCT GTTTTCGATC AATGTCGCGG GCACGCTGTT CACCTTGCAG GCAGCGGCAA AGCAGATGAT TGCTCAGGGC CACGGCGGCA AGATCATCAA CATGGCCAGC CAGGCCGGCC GGCGTGGTGA AGCGTTGGTG GCGGTGTATT GCGCGACCAA GGCTGCGGTG ATCAGCCTGA CGCAATCGGC CGGGCTGGAC CTCATCAGGC ACGGTATCAA TGTGAATGCC ATCGCCCCTG GCGTAGTCGA TGGCGAGCAC TGGGATGGCG TGGACGCGAT GTTCGCCCGC TATGAAAACC GCCCGCGGGG CGAGAAAAAG AAACTGGTCG GCGAGCAGGT ACCCTACGGA CGCATGGGCA CCGCGGATGA CCTGACCGGC ATGGCTATCT TTCTCGCCTC GACCGACAGT GAATACGTGG TGGCGCAGAC TTACAACGTC GATGGTGGCA ACTGGATGAG CTGA
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Protein sequence | MKRLEGKSAL ITGSARGIGR SFAQAYIREG ASVAIADINL ERAQATAIEL GPNAYAVSMD VTDQASIDQA IAAVVAQTGK LDILINNAAL FDLAPIVDIT RDSYERLFSI NVAGTLFTLQ AAAKQMIAQG HGGKIINMAS QAGRRGEALV AVYCATKAAV ISLTQSAGLD LIRHGINVNA IAPGVVDGEH WDGVDAMFAR YENRPRGEKK KLVGEQVPYG RMGTADDLTG MAIFLASTDS EYVVAQTYNV DGGNWMS
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