| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0362 |
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| Symbol | |
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| ID | 1181971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 396350 |
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| End bp | 397132 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637391730 |
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| Product | transcriptional regulator, DeoR family |
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| Protein accession | NP_790211 |
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| Protein GI | 28867592 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCCCG ATCAGCGCCG GGAGCTGATG CTGCGTCAGT TGCGCAAGCA TCAGGTACTC
AGCGTTCATC AGTTAATGGA GATGTTCGAC TGCTCGCACA TGACCATCCG CCGCGACATC
GCTCAGCTGG AGCAGGAAGG CCGGGCCTAT TCGGTCACCG GTGGCGTGCG CATCGCCAGC
CAGGTGCACA GCGAGCCCAG CCATCAGTCC AAAGCCGTGG TAGAACTGCC GCACAAGCAA
GGCATGGCGC GGCTGGCAGC AGGTTTGCTG CACCCGGACA TGACGATTTA CCTGGACGCA
GGCACCAGCA CGCTGGAAAT CGTGCCGCAC ATTATCGCGC TGTCAGGCAT GACCGTGGTG
ACCAATGATT TCGGCGTGGT CAACGCACTG GCCGATGCTG CGCATGTGGA TGTGATTCAC
ACCGGCGGGC TGCTCGATCA CCCCAATCGC TCCAGCGTCG GTGGGCTGGC TGCAGCGACG
TTGCGGCAAT TGGCCACCGA CGTGGCGTTC ATGTCTACCA GCTCGTGGGA CTTGCAGCGC
GGTACCACGA CGCCGTCGGC CTTGAAAGTC GAGGTCAAGC AGGCCGCCAT GCAATCAGCC
TCGCAAACGG TTTTGGTCGC CACCAGCTCC AAATACGGCA CCTTCGGCAT GTACAAGGTG
GCCGGGCTGG ATCAGTTCGA CACCATCATC AGCGACGCAG CCTTGGCTGA AGCCGCAGCC
GACGGCATTC GCAAGCAGCG CATCGAGTTG CTGCTGGCCC CCGTGGGCGG TCGCTCAAAG
TAG
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| Protein sequence | MIPDQRRELM LRQLRKHQVL SVHQLMEMFD CSHMTIRRDI AQLEQEGRAY SVTGGVRIAS
QVHSEPSHQS KAVVELPHKQ GMARLAAGLL HPDMTIYLDA GTSTLEIVPH IIALSGMTVV
TNDFGVVNAL ADAAHVDVIH TGGLLDHPNR SSVGGLAAAT LRQLATDVAF MSTSSWDLQR
GTTTPSALKV EVKQAAMQSA SQTVLVATSS KYGTFGMYKV AGLDQFDTII SDAALAEAAA
DGIRKQRIEL LLAPVGGRSK
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