Gene PSPTO_0353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0353 
SymbolntrB 
ID1181962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp386144 
End bp387229 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content60% 
IMG OID637391721 
Productnitrogen regulation protein NtrB 
Protein accessionNP_790202 
Protein GI28867583 
COG category[T] Signal transduction mechanisms 
COG ID[COG3852] Signal transduction histidine kinase, nitrogen specific 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTATCA GCGACGCGCT GCACAGACTG TTACTGGATA ACCTGACCAC TGCCACCATT 
CTGCTCAACG CCGACCTGCG ACTTGAGTAC ATGAACCCGG CAGCGGAAAT GCTCCTGGCC
ATCAGCGGGC AGCGTAGCCA TGGGCAATTC ATCAGCGAGC TGTTCACCGA GTCGGCTGAG
GCACTGAGTT CGCTGCGTCA GGCAGTGGAA CAGGCACACC CGTTCACCAA GCGCGAAGCG
ATGCTCACCG CACTGACCGG TCAGACATTG ACTGTCGACT ATGCCGTGAC GCCCATCCTC
AGCAAGGGCG ATACCCTGCT GCTGCTTGAA GTGCATCCCC GTGACCGGCT GTTGCGCATC
ACCAAGGAAG AAGCCCAGCT GTCCAAACAG GAAACCACCA AGATGCTGGT GCGCGGCCTG
GCTCACGAAA TAAAGAATCC GCTCGGCGGC ATTCGCGGCG CTGCGCAATT GCTGGCCCGC
GAACTGCCCG AAGAAAGCCT CAAGGATTAC ACCAACGTCA TCATCGAAGA GGCCGACCGC
CTGCGTAATC TGGTTGACCG CATGCTGGGC TCCAACAAGC TGCCGTCGCT GGCGATGACC
AACGTGCACG AAGTGCTTGA ACGGGTGTGC AGCCTGGTGG AGGCCGAGAG CCGGGGCTGC
ATCACGTTGG TGCGTGACTA TGACCCCAGC ATTCCCGACG TTTTGATCGA CCGCGAGCAG
ATGATCCAGG CGGTGCTCAA TATCGTGCGT AACGCCATGC AGGCCATCAG CGGCCAGAAC
GAACTGCGTC TGGGCCGGAT CACCATGAGA ACCCGCGCCA TGCGCCAGTT CACCATCGGG
CATGTGCGCC ACCGACTGGT GAGCAAGATC GAAATTATCG ACAACGGCCC GGGCATCCCG
GCCGAGCTTC AGGAAACCAT TTTCTATCCG ATGGTCAGTG GTCGCCCGGA CGGCACAGGG
CTCGGTCTCG CCATTACCCA GAACATCATC AGCCAGCACC AGGGCCTGAT CGAGTGTGAC
AGCCATCCCG GCCACACCAC GTTCTCGATC TTCCTGCCGC TGGAACAAGG AGCAGCTTCG
ACATGA
 
Protein sequence
MTISDALHRL LLDNLTTATI LLNADLRLEY MNPAAEMLLA ISGQRSHGQF ISELFTESAE 
ALSSLRQAVE QAHPFTKREA MLTALTGQTL TVDYAVTPIL SKGDTLLLLE VHPRDRLLRI
TKEEAQLSKQ ETTKMLVRGL AHEIKNPLGG IRGAAQLLAR ELPEESLKDY TNVIIEEADR
LRNLVDRMLG SNKLPSLAMT NVHEVLERVC SLVEAESRGC ITLVRDYDPS IPDVLIDREQ
MIQAVLNIVR NAMQAISGQN ELRLGRITMR TRAMRQFTIG HVRHRLVSKI EIIDNGPGIP
AELQETIFYP MVSGRPDGTG LGLAITQNII SQHQGLIECD SHPGHTTFSI FLPLEQGAAS
T