| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0347 |
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| Symbol | |
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| ID | 1181956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 377461 |
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| End bp | 378507 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637391716 |
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| Product | transcriptional regulator, LacI family |
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| Protein accession | NP_790197 |
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| Protein GI | 28867578 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGACG AAAAACCTGC GACACGCAAA CGCCGAGGCG CCGGCCGGGT GACGATCACC
GCCGTGGCAC GCCAGGCGGG GGTGTCGGCC ATCACCGTGT CGCGCTATTT CAATCAGCCG
GAGCAAGTCT CGCCCGAACT GCGCGAACGC ATCGCGGCGG TGGTCAATAC GCTGGGCTAT
GTGCCCAACC TGGTGGCAGG CGGCCTGGCG TCGGCGCGCA GCAAGGTGGT GGCGATGGTG
ATTCCCAACA TCTCCGGGCC GATCTTCGCC AACACTATTC AGGGCTTCAG CGACACCTTG
AGCCAGCATG GTTTCCAGTT GTTGCTGGCC TCCAGCTACT TTTCCGCCGA GCAGGAAGAA
AGCGCCGTGC GGGCGTTTCT GGGCTGGTCT CCGGCGGCCT TGGTGCTGAC CAGTCACTTC
CACAGCCCGG CGACTGAGAA GATGATCGAG CAGACCGAGG TCCCGGTGAT TGAAACCTGG
GACCATCAGC CTGACCGCAG CCCGATTCAG ATTGGTTTTT CCCACTACGA CGTGGGCGTT
AGCGCAGCCC GCTATCTGTA TGCCAAAGGC TATCGCCGCA TCGCGTTCGT ACAGAACAGC
GTCGCGGGCG ACTTCAGCGC ACTGGAGCGG CGCGACGGTT ATGCCGCGAC GCTGGAAGGG
CTTGGCCTGA GGCCGTGGGT ATTTGTCCCG GACGCCGGGC GAGCGCCTTT CGAGGCAGGC
AAGCAGGCCA TGGAAATGCT GATGAGCCAA GCGCCGCGCC CCGACGCCAT CTTCTTCGCC
AACGACAACC TGGCAGCCGG CGCCCTGCTC GCCAGCCAGC GCGCAGGCCT GCACATCCCG
CAGGACTGCG CCGTCATGGG CTTTGGCGAC TACGCCTTCG CAGAAATGAT GCTGCCCAGC
CTTACTACAA TCAAACCACC TGCACTGGAG ATCGGCGTAA TGGCCGCAAC CCGCGTGCTG
GAGAGTTTTG GGGTGCTGCC GGTGGAGGGG GCACCGCAGC GGCTGAATTT GCTCGATTGC
AGGTTGGTGG AGCGGGAAAG TACGTGA
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| Protein sequence | MADEKPATRK RRGAGRVTIT AVARQAGVSA ITVSRYFNQP EQVSPELRER IAAVVNTLGY
VPNLVAGGLA SARSKVVAMV IPNISGPIFA NTIQGFSDTL SQHGFQLLLA SSYFSAEQEE
SAVRAFLGWS PAALVLTSHF HSPATEKMIE QTEVPVIETW DHQPDRSPIQ IGFSHYDVGV
SAARYLYAKG YRRIAFVQNS VAGDFSALER RDGYAATLEG LGLRPWVFVP DAGRAPFEAG
KQAMEMLMSQ APRPDAIFFA NDNLAAGALL ASQRAGLHIP QDCAVMGFGD YAFAEMMLPS
LTTIKPPALE IGVMAATRVL ESFGVLPVEG APQRLNLLDC RLVEREST
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