| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0346 |
|---|
| Symbol | thrB |
|---|
| ID | 1181955 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 376407 |
|---|
| End bp | 377357 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637391715 |
|---|
| Product | homoserine kinase |
|---|
| Protein accession | NP_790196 |
|---|
| Protein GI | 28867577 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2334] Putative homoserine kinase type II (protein kinase fold) |
|---|
| TIGRFAM ID | [TIGR00938] homoserine kinase, Neisseria type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGTTT TTACCCCACT GGCTCGGCCC GAGCTGGAAA CATTTCTCGC CCCTTACGGG
CTCGGCCGCC TGCTTGACTA TCAGGGCATT GCCGCCGGCA GTGAAAACAC CAATTACTTC
ATCAGCCTGG AGCAGGGTGA ATTTGTCCTG ACGCTGGTCG AGCGTGGCCC GGTGCAGGAG
ATGCCGTTCT TCATCGAACT GCTCGATGTG CTGCACGACG CCAACCTGCC GGTGCCCTAC
GCGCTGCGCA CCACCGACGG TCAGGCCCTG CGCGAGCTGG CGGGCAAGCC TGCGCTCTTG
CAGCCGCGGC TGCCGGGCAA GCACATCAGC GAGCCCAACA CCCAGCATTG CGTGCAGATT
GGCGAACTGT TGGCCAACCT GCACCTGGCC ACCCGCGAGC AGGTGCTTGA GCGCAAGACT
GACCGTGGTC TTGACTGGAT GCTCAGCGAG GGACGCAATT TTCTGTCGCA TCTGGGCGAG
ACTCAGCGCG CCCTGCTTGA AAAGAGTCTT CAGGAGATCG AAGACCTCAA GCCGCAGATC
ATGGCATTGC CGCGCGCCAA TCTGCATGCC GACCTGTTTC GTGACAACGT GCTGTTCGAG
GGCACACACC TGACCGGGCT GATCGATTTC TACAACGCCT GTTCCGGTCC GATGCTCTAC
GACCTGGCGA TTGCCCTCAA CGACTGGTGC TCCCGCGAAA ACGGCCAGCT CGACGCCGTC
CGCGCCCGCG CGCTGTTGGG TGCCTATGCC GGCTTGCGTC CGTTCACCGC TGCCGAATCA
AAGCTGTGGG CAACAATGTT GCGCATAGCC TGCGTGCGTT TCTGGCTGTC CCGCCTGATC
GCCGCCGAGA CCTTCGCCGG GCAGGACGTG CTGATTCACG ACCCTGTCGA GTTCGAACAG
CGCCTGGCAG AGCGTCAAAC GCCACACATC GCGTTGCCGT TTGCGCTCTG A
|
|---|
| Protein sequence | MSVFTPLARP ELETFLAPYG LGRLLDYQGI AAGSENTNYF ISLEQGEFVL TLVERGPVQE
MPFFIELLDV LHDANLPVPY ALRTTDGQAL RELAGKPALL QPRLPGKHIS EPNTQHCVQI
GELLANLHLA TREQVLERKT DRGLDWMLSE GRNFLSHLGE TQRALLEKSL QEIEDLKPQI
MALPRANLHA DLFRDNVLFE GTHLTGLIDF YNACSGPMLY DLAIALNDWC SRENGQLDAV
RARALLGAYA GLRPFTAAES KLWATMLRIA CVRFWLSRLI AAETFAGQDV LIHDPVEFEQ
RLAERQTPHI ALPFAL
|
|---|
| |