| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0344 |
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| Symbol | polI |
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| ID | 1181953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 373243 |
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| End bp | 376020 |
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| Gene Length | 2778 bp |
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| Protein Length | 925 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637391713 |
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| Product | DNA polymerase I |
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| Protein accession | NP_790194 |
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| Protein GI | 28867575 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI)
[COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATTCTGC TCATGACCCA AGCGCCGCTC GTCCTGGTGG ACGGTTCTTC TTACCTCTAC
CGCGCCTTCC ACGCCCTGCC ACCCCTGACC ACGTCCAAAG GGTTGCCGAC CGGCGCCGTC
AAGGGCGTGC TCAACATGCT CAAAAGCCTG CGCCGTCAAT ACCCGGACAG CCCGCTCGCG
GTCGTCTTCG ATGCCAAGGG CGGGACGTTC AGGGACGCGC TGTACACCGA CTACAAGGCC
AACCGGCCGA GTATGCCGGA TGACCTGCGC GTGCAGGTCG ATCTGCTGCA CGCTTGCGTG
AAAGGCATGG GCTATCCGTT TTTGTGCGTT GAAGGCGTCG AAGCGGATGA TGTGATCGGC
ACCCTGGCGC GCAGCAGCGC GGCGGCTGAT CGTCCGGTGG TCATTTCCAC CGGCGACAAG
GACATGGCGC AGCTGGTCGA TGGCCATATC ACGCTGGTCA ACACCATGAC CGGCAGCGTG
CTGGACGTGG CGGGCGTAAA AGAAAAATTC GGCGTCGGCC CGGAGCACAT CATCGACTAC
CTCGCTCTGA TGGGCGACAA GGTCGATAAC ATCCCCGGCG TGCCCGGCGT TGGCGAAAAA
ACCGCTGTCG GCCTGCTGGT GGGCGTGGGT GGCGGGATCA AGGAGCTTTA CGACAACCTG
GAAATGGTCG CGACCCTGCC GATCCGCGGC GCCAAGACCC TGGCCGCCAA GCTTGAAGAA
CACCGCGCGA TGGCCTTCCT CTCTTACGAG TTGGCGACCA TCAAGATCGA CGTGCCGCTG
GACATCGAGC TGGAGCAGTT GCATTGCAGC GAGCCAGACC GCGACAAGCT GATGGAACTG
TACGCCGAGC TGGAATTCAA GAGCTGGATC GAAGACCTGC AACGCGATGC CAAACGCGCA
GGCCAGGAGC TGGTGGTCGA AGAGCCGACC GTGGCAGCCA AGGAAGCAGC GTACGAGGTC
ATTCTTGAGC AAGGGCAGTT CGACGCCTGG CTGAAAAAGC TTCAGGCGGC ACCGCTTTTC
GCCTTCGTTA CCCAGAGCAA CGGCACCGAC GCCCAGCGTG CGCAACTGGT GGGCCTGTCT
TTCGCCATCC AGCCCCACGA AGCCGCCTAC ATCCCGCTGA CCCACTCCTA TATGGGCGTG
CCGCAGCAAC TGGATCGCGA CACCGTCCTC AAGACGCTCA AGCCGCTACT GGAAGACCCG
AACAAGATCA AGGTCGGTCA GCACGCCAAA TTTGCCATCA ACCTGCTCGC CAACTGCGCG
ATCGGCGGTG ATCAGGCGCA GGGCATCGAG CTGCAGGGTG TGCGCTTTGA CACCATTCTT
GAATCCTACG TACTGGACTC CACCGCCACT CGCCACGACC GCGACAGCCT GGTGGCCAAG
TACCTGACGC ATACGCCGAT CAACTTCCAG GACATCGCCG GCAAGGGTGC CAAGCAGCTG
ACCTTCGACC AGATCGCCAT CGAGCAGGCC GGTAACTACG CCGCCGAAGA GGCCGACCTG
ACCCTGCGCC TGCATGAAGT CTTCGAAGCC CGCCTGGCCG CGATTCCGAC CTTGCAGCCG
GTGCTCAACG AGATCGAGAT GCCATTGGTG CCGGTGCTGG CCCGCATCGA ACGTCAGGGC
GCGCTGGTCG ATGCCAACCT GCTGGGCATC CAGAGCGTTG AGCTGGGCGA CAAGATGACC
GCACTGGAGC GCGAGGCGTT CGCCATTGCC GGTGAAGAAT TCAACCTCGG TTCGCCCAAG
CAGCTTGGCG TGATTCTCTA CGAAAAACTC GGCATGCCGA TCCTGAGCAA GACCGCCACC
GGCCAGCCAT CGACAGCCGA GGCGGTGCTT GCCGAGCTCG CCGAACAGGA CTTCCCGCTG
CCCAAGGTGC TGATGCAGTA CCGCTCGATG AGCAAGCTCA AGAGCACCTA TACCGACCGC
CTGCCCGAGC AGATCAACCC GCGCACCGGG CGTATTCACA CCTCCTATCA TCAGGCGGTA
GCCGTGACCG GGCGTTTGTC TTCCAGCGAC CCGAATCTGC AGAACATCCC TATTCGTACC
GCCGAAGGCC GCCGCATCCG TCAGGCGTTC GTGGCGCCCA AGGGTTACAA GCTGCTGGCG
GCAGACTATT CGCAGATTGA ACTGCGGATC ATGGCGCACC TGGCCAAGGA CGAAGGCTTG
CTGCATGCGT TCCGCAACGA CCTGGACGTC CACCGCGCGA CAGCGTCGGA AGTTTTCGGC
GTCGAACTGG AGAACGTCAC CACCGACATG CGCCGCAGCG CCAAAGCGAT CAACTTCGGC
CTGATCTACG GCATGAGCGC ATTTGGCCTG GCCAAACAGA TCGGCGTGGA CCGCAAGCAG
TCGCAGGCGT ATGTCGATCG CTATTTTGCC CGCTACCCCG GCGTGCTGGA CTATATGGAG
CGCACGCGCA CCCAGGCCGC CGAGCAGGGC TTCGTCGAGA CTATTTTCGG CCGTCGCCTG
TACCTGCCGG ACATCAACGC CAAGAACCCT TCACTGCGCA ACGGCGCGCA ACGCATGGCG
ATCAACGCGC CGATGCAGGG CACGGCGGCG GACATCATCA AAAAAGCGAT GGTGGCGGTG
AATGGCTGGC TGGACGAATC CGGCCTGGAT GCACGGGTCA TCCTGCAGGT GCACGATGAA
CTGGTACTGG AAGTGCGCGA AGACCTGGTT GATCAGATCA GCGAGCAGAT CCGTCCACAC
ATGAGCGGAG CGGCAGAACT GGCAGTGCCG CTGCTGGTGG AAGTCGGGGT CGGCAACAAC
TGGGACGAGG CACATTAA
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| Protein sequence | MILLMTQAPL VLVDGSSYLY RAFHALPPLT TSKGLPTGAV KGVLNMLKSL RRQYPDSPLA
VVFDAKGGTF RDALYTDYKA NRPSMPDDLR VQVDLLHACV KGMGYPFLCV EGVEADDVIG
TLARSSAAAD RPVVISTGDK DMAQLVDGHI TLVNTMTGSV LDVAGVKEKF GVGPEHIIDY
LALMGDKVDN IPGVPGVGEK TAVGLLVGVG GGIKELYDNL EMVATLPIRG AKTLAAKLEE
HRAMAFLSYE LATIKIDVPL DIELEQLHCS EPDRDKLMEL YAELEFKSWI EDLQRDAKRA
GQELVVEEPT VAAKEAAYEV ILEQGQFDAW LKKLQAAPLF AFVTQSNGTD AQRAQLVGLS
FAIQPHEAAY IPLTHSYMGV PQQLDRDTVL KTLKPLLEDP NKIKVGQHAK FAINLLANCA
IGGDQAQGIE LQGVRFDTIL ESYVLDSTAT RHDRDSLVAK YLTHTPINFQ DIAGKGAKQL
TFDQIAIEQA GNYAAEEADL TLRLHEVFEA RLAAIPTLQP VLNEIEMPLV PVLARIERQG
ALVDANLLGI QSVELGDKMT ALEREAFAIA GEEFNLGSPK QLGVILYEKL GMPILSKTAT
GQPSTAEAVL AELAEQDFPL PKVLMQYRSM SKLKSTYTDR LPEQINPRTG RIHTSYHQAV
AVTGRLSSSD PNLQNIPIRT AEGRRIRQAF VAPKGYKLLA ADYSQIELRI MAHLAKDEGL
LHAFRNDLDV HRATASEVFG VELENVTTDM RRSAKAINFG LIYGMSAFGL AKQIGVDRKQ
SQAYVDRYFA RYPGVLDYME RTRTQAAEQG FVETIFGRRL YLPDINAKNP SLRNGAQRMA
INAPMQGTAA DIIKKAMVAV NGWLDESGLD ARVILQVHDE LVLEVREDLV DQISEQIRPH
MSGAAELAVP LLVEVGVGNN WDEAH
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