Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0326 |
Symbol | |
ID | 1181935 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 355873 |
End bp | 356256 |
Gene Length | 384 bp |
Protein Length | 127 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637391695 |
Product | hypothetical protein |
Protein accession | NP_790176 |
Protein GI | 28867557 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACATTC CCGAGGATCT GACCCAAAGC GCCTACTTCA AGATGCTCGG CTGCGAGCTG CGGCGTCTTG ACGAGGGCGT GGCCGAAGTT GCGCTGCCGC TGGAGGCGCA CCTGCGCAAT CGCGGCAACG TGATGCACGG CGGGGCGATC TTCAGTCTGG TCGATATCAG CATGGGGCTG GCCTGTTCCA GCTCTCATGG TTTTGACCAG CGCAGCGTGA CCATCGAGTG CAAGATCAAC TACGTGCGTG GCGTGTCCGA CGGCGAAGTC CTGTGCATCG CCAACGTGCT GCATGCGGGC CGCAGGACGC TGGTGGTCGA GGCGCAAGTC GTGCAGGGCG ACAAGCTCGT CGCCAAAGCT CAGGGCACGT TTGCGGTCAT CTAA
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Protein sequence | MDIPEDLTQS AYFKMLGCEL RRLDEGVAEV ALPLEAHLRN RGNVMHGGAI FSLVDISMGL ACSSSHGFDQ RSVTIECKIN YVRGVSDGEV LCIANVLHAG RRTLVVEAQV VQGDKLVAKA QGTFAVI
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