Gene PSPTO_0326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0326 
Symbol 
ID1181935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp355873 
End bp356256 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content62% 
IMG OID637391695 
Producthypothetical protein 
Protein accessionNP_790176 
Protein GI28867557 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACATTC CCGAGGATCT GACCCAAAGC GCCTACTTCA AGATGCTCGG CTGCGAGCTG 
CGGCGTCTTG ACGAGGGCGT GGCCGAAGTT GCGCTGCCGC TGGAGGCGCA CCTGCGCAAT
CGCGGCAACG TGATGCACGG CGGGGCGATC TTCAGTCTGG TCGATATCAG CATGGGGCTG
GCCTGTTCCA GCTCTCATGG TTTTGACCAG CGCAGCGTGA CCATCGAGTG CAAGATCAAC
TACGTGCGTG GCGTGTCCGA CGGCGAAGTC CTGTGCATCG CCAACGTGCT GCATGCGGGC
CGCAGGACGC TGGTGGTCGA GGCGCAAGTC GTGCAGGGCG ACAAGCTCGT CGCCAAAGCT
CAGGGCACGT TTGCGGTCAT CTAA
 
Protein sequence
MDIPEDLTQS AYFKMLGCEL RRLDEGVAEV ALPLEAHLRN RGNVMHGGAI FSLVDISMGL 
ACSSSHGFDQ RSVTIECKIN YVRGVSDGEV LCIANVLHAG RRTLVVEAQV VQGDKLVAKA
QGTFAVI