Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0309 |
Symbol | cysT |
ID | 1181918 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 336472 |
End bp | 337293 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637391678 |
Product | sulfate ABC transporter, permease protein CysT |
Protein accession | NP_790159 |
Protein GI | 28867540 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0555] ABC-type sulfate transport system, permease component |
TIGRFAM ID | [TIGR00969] sulfate ABC transporter, permease protein [TIGR02139] sulfate ABC transporter, permease protein CysT |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGCGTC GTATCTCCCC CGTCATACCC GGCTTCGGGC TGACGCTGGG CTACACCTTG GTGTACCTCA GTCTGATTGT GCTACTACCG CTGGCCGCCA TGTTCATACA TGCCGCGCAG CTTACCTGGG ATCAGTTCTG GACCATCATC ACGGCGCCTC GCGTGATTGC GGCACTCAAA CTGAGTTTCG GCACCGCGTT CTACGCGGCC CTGATCAACG GCGTGATCGG TACGCTGCTG GCCTGGGTGC TGGTGCGTTA CACCTTCCCC GGCCGCAAGA TCATCGATGC GATGATCGAT TTGCCGTTCG CCCTGCCGAC CGCCGTGGCC GGTATCGCCC TGACAGCGCT GTACGCACCC AATGGCTGGG TCGGGCAGTT CGCCGCTGAT CTTGGCTTCA AGATCGCCTA CACCCCGCTG GGCATTACGC TGGCGCTGAC GTTTGTCACG CTACCGTTCG TGGTGCGTAC CGTGCAGCCT GTACTGGCCG ATATCCCGCG AGAAGTCGAA GAAGCCGCCG CCTGTCTGGG TGCGCGTCCG CTGCAGGTGT TCCGCCACAT CCTTGTTCCG GCCTTGCTGC CAGCCTGGCT GACCGGTTTT GCGCTGGCGT TTGCCAGGGG CGTGGGCGAG TACGGTTCGG TGATTTTCAT CGCCGGCAAC ATGCCCATGA AAACCGAGAT TCTGCCGCTG CTGATCATGG TCAAACTCGA CCAGTACGAT TACACCGGCG CCACCGCTAT CGGCGTAATG ATGCTGGTGG TTTCCTTCAT TCTGCTGCTG CTGATCAATC TGCTGCAGCG GCGTATCGAA ACCCCATCCT GA
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Protein sequence | MSRRISPVIP GFGLTLGYTL VYLSLIVLLP LAAMFIHAAQ LTWDQFWTII TAPRVIAALK LSFGTAFYAA LINGVIGTLL AWVLVRYTFP GRKIIDAMID LPFALPTAVA GIALTALYAP NGWVGQFAAD LGFKIAYTPL GITLALTFVT LPFVVRTVQP VLADIPREVE EAAACLGARP LQVFRHILVP ALLPAWLTGF ALAFARGVGE YGSVIFIAGN MPMKTEILPL LIMVKLDQYD YTGATAIGVM MLVVSFILLL LINLLQRRIE TPS
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