| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0287 |
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| Symbol | |
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| ID | 1181895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 314157 |
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| End bp | 315395 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637391655 |
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| Product | site-specific recombinase, phage integrase family |
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| Protein accession | NP_790137 |
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| Protein GI | 28867518 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCTGTCAC CCTGCTGTCA CGGACAAAGC ATGAAGACCA AGATCACCGG CAAGACGATA
TCCCGCATTG TGCCAGCGGA GAAGGTTTAC CGCATCCACG ACACTCTCCA GCCCGGTCTT
TCAATACGGG TTCTGCCCAG TGGTCACGCG AGCTATATGG TCACGTGGGC ACGGAACAAG
GCGGCCACCC TTGGCCGTGT CGGCGTGATC ACGCTTGAGC AGGCCAGGAC GGACGCATCA
AGGTATCTGG CAGATGCTCA CGCAATAGGT GAGCCAGTGG CAATCACTGA GAAGCGTACC
GGCGCTGCTA TGCCGACGCT CGACCATTTC CTAACCCACA CGTTCGAACC TTGGGCCGCG
GAGCACCACC GGGACGCCAA GAACGGAAAT CGGGCGATCA GGCACAGTTT CGAAGCGCTG
CTCTCAATAC CGCTCAGTAG CATCGACACC AAGCGTGTAG AACAGATCCG CACCGCCTGG
CTTCGTGCCG GCTTGGCACC ATCGACAGCG AATAGAAATA TCACCCGGCT ACGTGGCGTG
CTGAGCCGCG CGCTGGAGTG GGGAGTACTG CAGGAGCACC CTCTCAAGGT GCGCAAGCTC
AAGGTCGACG ACCGCAGCCG GGTGCGATAC CTCAGCATTG AGGAAGAAAC AGCTCTGCGA
GAGGCTCTGG AGGCCCGCAG CAACGAAATG CGCGATGCCC GCGACAGTGC AAACAAGTGG
CGACTGGAGC GCCATAAAGA GCCATTGGCG GACCTGCGCG CGGTTCGCTA CGCCGATCAC
CTGGAGCCGC TGGTGGTGCT CTCGATCAAT ACCGGCGTGC GCCGTGGCGA GGCCTTTAAT
CTGACCTGGG CAGATGTCGA CCTGAAGAAC AAGCTGATCA CCGTCGAGGG TGACACCTCG
AAGTCAGGGC AGACCAGGCA CGTCCCGCTG AACCGCGAGG CGCTGGACAC ATTGACGAAG
TGGAAAGAGC AGCGGGGCGG CAATGGGTTC GTCTTCCCCG GCCAGCACGG CAAACGGTTG
GATAACGTCA AGAAGAGCTG GAGCGGCCTG CTCAAATTGG CCAAAGTGGA GCGCTTCCGG
TGGCACGATC TGCGCCACAC CTTCGCGTCC AAACTTGTGA TGGCCGGCGT ACCGCTCAAC
ACAGTGCGTG AGCTGCTGGG GCACACCGAC ATCAAGATGA CTTTGCGCTA TGCGCACTTG
GCACCGGGCA CGAAGGCCGC GGCGGTGGAG CTGATTTAG
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| Protein sequence | MLSPCCHGQS MKTKITGKTI SRIVPAEKVY RIHDTLQPGL SIRVLPSGHA SYMVTWARNK
AATLGRVGVI TLEQARTDAS RYLADAHAIG EPVAITEKRT GAAMPTLDHF LTHTFEPWAA
EHHRDAKNGN RAIRHSFEAL LSIPLSSIDT KRVEQIRTAW LRAGLAPSTA NRNITRLRGV
LSRALEWGVL QEHPLKVRKL KVDDRSRVRY LSIEEETALR EALEARSNEM RDARDSANKW
RLERHKEPLA DLRAVRYADH LEPLVVLSIN TGVRRGEAFN LTWADVDLKN KLITVEGDTS
KSGQTRHVPL NREALDTLTK WKEQRGGNGF VFPGQHGKRL DNVKKSWSGL LKLAKVERFR
WHDLRHTFAS KLVMAGVPLN TVRELLGHTD IKMTLRYAHL APGTKAAAVE LI
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