Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0285 |
Symbol | |
ID | 1181893 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 309736 |
End bp | 310818 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637391654 |
Product | hypothetical protein |
Protein accession | NP_790136 |
Protein GI | 28867517 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.353958 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAATGCAT TCGATGAGCT GGTATTTGCC CCAATGTATG TAACCAGCGT CGACGGGCGT CAGGCAGGAG TCTTCCATGC GCATAAAGGG CGGCGGTTGA TTGCGGCGCA CAGGAAAGCT GGAACAACTC CATTCGTAGG CGCGTCGAGG GTAAACAATA GCATTACCGG TTTTGCCGAC ACTCCCGCAC TCTTTCCTGG AGGATGGATA ACATTGATCT ACAACGGCGA CGGAGGAACT GGTCACGCGA AGTATCAACC AGCTCCATTT AACGCCTCTG ATGACGTCAT CGCTCTCGAA CCGATATCGA AACAGGCTAC CGAACCAGCC TTGCTGCTGA TCGCGAGCAT GCTCACGCTG CAATGCGTTC CGAAATTTGG GTTCGGCTAT AAGTTGACCT TACATCGCCT TGATCGTCAA AAAATCATGA TTCCCGTGCT TACCAATGCC GATGGCGAGC AGGTCGTTAA CTGGAGCGGA TTGACGCGCC ATGGCAAGAG ACTGTTAAAC GAAGCAAAGA CCAGGGCCCG GGCCGTTCGT GAATTGACCT CAACTGCGAA GCCGAAACTT CCCGAGCTGA ACTACATGCC GATGTTTATC ACAGATGTGT TTGAGTCAAT GAATGCAGCT GGCAAATGGT TCGATTTTGC AAAGGCTTGC TTGTCTGGAA AACCGTTTGC CCCGTATATT GCGCGCTCGG GAGGCGGAAA TGGGGTGGGA TCATTTGTCC CGCATCAAGG GTTCGCCCCA CCCAATGCCG GAAACGCCAT CACAATCGGA GTTTCCACTT CGACCGTGTT TTATCAACCC GTACCCTTCT ACACCAGCAA AGAGATCCAG GTCCTTCGGC ACCATAAGCT TACGGCTGAC AGCGGGCTTA TTCTTGTCGC GCTACTTCGA GAGCAAATGG GCAAATTTCA ATGGGGTAAC GGAGCATCTT TGGAGCGGCT TAAAGCCACC CGGATCATGG TGCCAGCGAT GGTTGGAGCC GACGGTGAGG ATGTGGTGGA TTGGGATGGT TTGAGCCGCT ACGGGCGCGC ACTTCGCGCC CGGGTAGAGC TTGCAATAAA TGCGGTATTG TAA
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Protein sequence | MNAFDELVFA PMYVTSVDGR QAGVFHAHKG RRLIAAHRKA GTTPFVGASR VNNSITGFAD TPALFPGGWI TLIYNGDGGT GHAKYQPAPF NASDDVIALE PISKQATEPA LLLIASMLTL QCVPKFGFGY KLTLHRLDRQ KIMIPVLTNA DGEQVVNWSG LTRHGKRLLN EAKTRARAVR ELTSTAKPKL PELNYMPMFI TDVFESMNAA GKWFDFAKAC LSGKPFAPYI ARSGGGNGVG SFVPHQGFAP PNAGNAITIG VSTSTVFYQP VPFYTSKEIQ VLRHHKLTAD SGLILVALLR EQMGKFQWGN GASLERLKAT RIMVPAMVGA DGEDVVDWDG LSRYGRALRA RVELAINAVL
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