Gene PSPTO_0285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0285 
Symbol 
ID1181893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp309736 
End bp310818 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content53% 
IMG OID637391654 
Producthypothetical protein 
Protein accessionNP_790136 
Protein GI28867517 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.353958 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATGCAT TCGATGAGCT GGTATTTGCC CCAATGTATG TAACCAGCGT CGACGGGCGT 
CAGGCAGGAG TCTTCCATGC GCATAAAGGG CGGCGGTTGA TTGCGGCGCA CAGGAAAGCT
GGAACAACTC CATTCGTAGG CGCGTCGAGG GTAAACAATA GCATTACCGG TTTTGCCGAC
ACTCCCGCAC TCTTTCCTGG AGGATGGATA ACATTGATCT ACAACGGCGA CGGAGGAACT
GGTCACGCGA AGTATCAACC AGCTCCATTT AACGCCTCTG ATGACGTCAT CGCTCTCGAA
CCGATATCGA AACAGGCTAC CGAACCAGCC TTGCTGCTGA TCGCGAGCAT GCTCACGCTG
CAATGCGTTC CGAAATTTGG GTTCGGCTAT AAGTTGACCT TACATCGCCT TGATCGTCAA
AAAATCATGA TTCCCGTGCT TACCAATGCC GATGGCGAGC AGGTCGTTAA CTGGAGCGGA
TTGACGCGCC ATGGCAAGAG ACTGTTAAAC GAAGCAAAGA CCAGGGCCCG GGCCGTTCGT
GAATTGACCT CAACTGCGAA GCCGAAACTT CCCGAGCTGA ACTACATGCC GATGTTTATC
ACAGATGTGT TTGAGTCAAT GAATGCAGCT GGCAAATGGT TCGATTTTGC AAAGGCTTGC
TTGTCTGGAA AACCGTTTGC CCCGTATATT GCGCGCTCGG GAGGCGGAAA TGGGGTGGGA
TCATTTGTCC CGCATCAAGG GTTCGCCCCA CCCAATGCCG GAAACGCCAT CACAATCGGA
GTTTCCACTT CGACCGTGTT TTATCAACCC GTACCCTTCT ACACCAGCAA AGAGATCCAG
GTCCTTCGGC ACCATAAGCT TACGGCTGAC AGCGGGCTTA TTCTTGTCGC GCTACTTCGA
GAGCAAATGG GCAAATTTCA ATGGGGTAAC GGAGCATCTT TGGAGCGGCT TAAAGCCACC
CGGATCATGG TGCCAGCGAT GGTTGGAGCC GACGGTGAGG ATGTGGTGGA TTGGGATGGT
TTGAGCCGCT ACGGGCGCGC ACTTCGCGCC CGGGTAGAGC TTGCAATAAA TGCGGTATTG
TAA
 
Protein sequence
MNAFDELVFA PMYVTSVDGR QAGVFHAHKG RRLIAAHRKA GTTPFVGASR VNNSITGFAD 
TPALFPGGWI TLIYNGDGGT GHAKYQPAPF NASDDVIALE PISKQATEPA LLLIASMLTL
QCVPKFGFGY KLTLHRLDRQ KIMIPVLTNA DGEQVVNWSG LTRHGKRLLN EAKTRARAVR
ELTSTAKPKL PELNYMPMFI TDVFESMNAA GKWFDFAKAC LSGKPFAPYI ARSGGGNGVG
SFVPHQGFAP PNAGNAITIG VSTSTVFYQP VPFYTSKEIQ VLRHHKLTAD SGLILVALLR
EQMGKFQWGN GASLERLKAT RIMVPAMVGA DGEDVVDWDG LSRYGRALRA RVELAINAVL