| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0272 |
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| Symbol | iscS-1 |
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| ID | 1181880 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 298850 |
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| End bp | 300016 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637391641 |
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| Product | cysteine desulfurase |
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| Protein accession | NP_790123 |
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| Protein GI | 28867504 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATTTGC CCATGACCAC ACCTGCTCTT TATCTGGATT ACGCCGCTAC CACGCCTGTT
GATGAACAGG TCATCGAAGC CATGGTGGCC TGTATGGGCC GCGAAGGTCA TTTCGGTAAT
CCGGCGTCCA GCGGGCACGG GTATGGGCAG GTTGCACGGC AGGCGGTCGA GCTGGCACGG
CGTCAGGTGG CCGATGCGGT GGGTGCGCCT GCGGATACTA TCGTCTGGAC GTCCGGCGCC
ACGGAGTCCA ACAACCTGGC GATCAAGGGC ATCGCTCATG ACAGCAGCGC GCAGCGCCGG
CACATCATTA CCAGTGTTCT GGAACACAAG GCGGTGCTTG ATACCGTCAG CACGCTGGAG
CGTCAGGGCT TTCCGGTTAC CTGGTTGAAA CCGGACGCCC AAGGCCTGAT CCAGCCGCAG
GCGGTTCAGG CTGCGCTGCG CGAAGACACG CTGCTGGTGT CGCTGATGCT GGTGAACAAC
GAGCTGGGCA CGCTGACTGA TATCGCCCGT ATTGGCGCTA TCGTGCGCGA ACACGGCGCG
CTGTTTCATG TGGATGCGGC GCAGGCGGTG GGCAAGGTGA AGGTTGATCT GGCGAGCCTC
GCTGTAGACC TGATGTCCTT TTCCGCGCAC AAGGCGTATG GCCCCAAAGG CATCGGCGCG
CTGTATGTAG GCCCGCGTGC TCATTCGCTG TTACAGGCGC AAATCCACGG CGGCGGGCAC
GAGGGCGGTT TTCGGTCGGG CACGCTGGCG ACGCATCAGA TCGTCGGCAT GGGCACCGCC
TTTGCGTTGG CGATCAGCCA GGCAGAAGCT GAAAATCGTC GCATCGAAGA ACTGAGCTGT
CATTTGCGTG AAGGCCTGCT GGCCCTGCCG GACGTGCAAC TCAATGGCAG CCCTGAGCAG
CGCATCCCGC ACACGCTCAA CCTGTGTATC ACCCGCAGCG GCTTCACAAG CTCGCAGTTG
TCTCACAACC TGGCGGTGTC CTCGACGTCT GCGTGCAACT CGGCGAGCAA TGCGCCTTCG
CATGTACTGC TTGCCCTGGG CATGGACTCC ACGAAAGCGC TCGCCAGCGT ACGCGTCAGC
CTGGGCCGCT ACACCACGCA GGCGGATGTC GAGCGTGCTG TTGAAGTGTT CAGCAAAGCC
CTCAGCGCTC CCGCTGCATT CTGGTAA
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| Protein sequence | MNLPMTTPAL YLDYAATTPV DEQVIEAMVA CMGREGHFGN PASSGHGYGQ VARQAVELAR
RQVADAVGAP ADTIVWTSGA TESNNLAIKG IAHDSSAQRR HIITSVLEHK AVLDTVSTLE
RQGFPVTWLK PDAQGLIQPQ AVQAALREDT LLVSLMLVNN ELGTLTDIAR IGAIVREHGA
LFHVDAAQAV GKVKVDLASL AVDLMSFSAH KAYGPKGIGA LYVGPRAHSL LQAQIHGGGH
EGGFRSGTLA THQIVGMGTA FALAISQAEA ENRRIEELSC HLREGLLALP DVQLNGSPEQ
RIPHTLNLCI TRSGFTSSQL SHNLAVSSTS ACNSASNAPS HVLLALGMDS TKALASVRVS
LGRYTTQADV ERAVEVFSKA LSAPAAFW
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