Gene PSPTO_0261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0261 
Symbol 
ID1181869 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand+ 
Start bp284127 
End bp284615 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content55% 
IMG OID637391630 
Producttranscriptional regulator, AsnC family 
Protein accessionNP_790112 
Protein GI28867493 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGGCT TGGTCAAACT GGATCGGATT GATATCAATA TCCTGGTAGA ACTCCAGAAA 
GACGGGCGCA TGACCAACGT CAGCCTGGCC GACGCCGTCG GGCTTTCCGC GAGCCCTTGC 
CTGCAGCGCG TCAAACGTCT GGAGTCGGCT GGGTACATCT CCAGCTACAA GGCGCACCTC 
AACCTCGCAA AAATCACCGA ATCGGTTACC GTGTTCACCG AAATCTCCCT GAGCGACCAC 
AAACGCGAAG ACTTTGCCAA ATTTGAAGCG AACATCCGCC ATGTGGACGA AGTGCTGGAG 
TGCCACCTGA TCAGCGGCGG GTACGACTAC CTGGTGCGCT TCATGACCCG CAGCATTCAG 
CATTATCAGG AAGTGATCGA AGAGCTGCTG GACAAGAACA TCGGCATCTC CAAGTACTTC 
AGCTACATCG TCATCAAATC CCCGGTCATG AAAGACGGCG TGCCGCTGCG CAAGTTGTTG 
CGGCATTGA
 
Protein sequence
MEGLVKLDRI DINILVELQK DGRMTNVSLA DAVGLSASPC LQRVKRLESA GYISSYKAHL 
NLAKITESVT VFTEISLSDH KREDFAKFEA NIRHVDEVLE CHLISGGYDY LVRFMTRSIQ 
HYQEVIEELL DKNIGISKYF SYIVIKSPVM KDGVPLRKLL RH