Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0255 |
Symbol | |
ID | 1181863 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 276686 |
End bp | 277840 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637391624 |
Product | oxidoreductase, FAD-binding protein |
Protein accession | NP_790106 |
Protein GI | 28867487 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACAAC CGAAAGTCGA TGTGCTGATT GTCGGTGGCG GCTTCATGGG CTCGGCGTCG GCGTTTTTTC TGCGCCAGCG CGGCAAGTCG GTGACCCTGC TGGAGCGTGA CGTGGTCGGC CAATATGCTA GCGGCGTGAA TTTTGGCAAC GTGCGGCGTC AGGGTCGTCA TCTGGGCCAG CTGGAGCTGT CCAACCGTTC CCGTGCACTC TGGCAGCGGC TGCCGGAACT GATCGGCGAG GACCTGGAAT TTCTGCCCAG CGGGCACATG CGCGTCTGCT ATCGCGAGGA CGAAATTGCC GAGCTGGAAG CTTATGCCGC TGCGCCAGAA GCGCGTGAGC TGGACCTGAA AATCTATCGC GGTAAAGCGC TGCACGAGCG TTTTCCGTTT CTCGGGTCTG ACGTGAAGGG CGGTTCCTAC GCGCCGCACG ATGGCCACGC CAACCCGCGT CTGGCCGCGC CTGCTTTTGC GCGTGCAGCG ATTCGTGCCG GGGCGCGGAT CGAAGAGCGT ACTGAAGTGG CGCATGTCGA AAAGGTCGGT AACGAATTTG AAGTCACCAC CACTGACGGG CGTATTTTCA CAGCTGATCA ATTGTTGATC ACCGCTGGCG CGTGGGGGCA GAAGCTCTCT GCGCAGTTTG GCGAACCCGT GCCGCTGGAG ACCAATGGCC CGCAGATGGC CGTGACCGAA CCGGTGCCTT ACGCGCTGCC GACCGTCATC GGCGTGTTCA CCAAAATCCC CCATGAAGTG ATTTATTTCC GGCAGATCGC GCGCGGCAAC ATTGTCATTG GCGGTGGCTT TCGCAGCAAG CCGGACATGG TCAATCGTCG CGCCTACGTC GAGCCGCGCA GCATCGTCAA TCAGGTCCAG CAGATGCGTC GTCTGCTGCC CGGTGTCGGT AACCTGAATA TCATCCGCGT GTGGAGCGGC ATCGAAGGCT ACACACCCGA CTCACTGCCG GTGATGGGCC GCAGCGGCAA GGTCGACGGG CTGTTTTATG CGTTCGCGTT CTGCGGGCAC GGCTTCCAGC TTGGTCCGGG CGTGGGCGAC GTGATGGCTG AACTGATCAG CACCGGCACG ACCAGCACCT CCATCAGCCC GTTCGACATT CGCCGTTTTG AAATCGTCAC CGAACACGCG AGCAAAGCCT CATGA
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Protein sequence | MKQPKVDVLI VGGGFMGSAS AFFLRQRGKS VTLLERDVVG QYASGVNFGN VRRQGRHLGQ LELSNRSRAL WQRLPELIGE DLEFLPSGHM RVCYREDEIA ELEAYAAAPE ARELDLKIYR GKALHERFPF LGSDVKGGSY APHDGHANPR LAAPAFARAA IRAGARIEER TEVAHVEKVG NEFEVTTTDG RIFTADQLLI TAGAWGQKLS AQFGEPVPLE TNGPQMAVTE PVPYALPTVI GVFTKIPHEV IYFRQIARGN IVIGGGFRSK PDMVNRRAYV EPRSIVNQVQ QMRRLLPGVG NLNIIRVWSG IEGYTPDSLP VMGRSGKVDG LFYAFAFCGH GFQLGPGVGD VMAELISTGT TSTSISPFDI RRFEIVTEHA SKAS
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