Gene PSPTO_0254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0254 
Symbol 
ID1181862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp275280 
End bp276689 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content65% 
IMG OID637391623 
Productpyridine nucleotide-disulfide oxidoreductase family protein 
Protein accessionNP_790105 
Protein GI28867486 
COG category[R] General function prediction only 
COG ID[COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCACTT CTTCACGGTT AGACGTTCAT AACCCTGGCA GCCCCAGAGT CGTCATCATT 
GGCGCGGGCC CGGCCGGCAC CCGCTGTGCG CAAACCCTGC TGGCGGCGGG CATCAAGCCG
ATCCTGATCG ACGAAAACCG GCGTGACGGC GGGCAGATCT ATCGCCGCCA GCCCGAAGGC
TTCAAGCGTG ATTACTCGGC GCTGTACGGC ACTGAAGCGG CCAAGGCGCG CGACCTGCAC
GAGAGCTTCG ACCGCCTGCG CAAACAGATC GACTATCGCC CTGACACGCT GGCCTGGAAC
CTCACGCAGG GCGAACTGTG CTGCGCCAGC CAGGGCGTGC ACAGCGTGGT CGAATACGAC
GCGCTGATAC TCTGCGCCGG TGCCACCGAC CGTCTGATGC CGATCAAAGG CTGGCAACTG
GCGGGCACCT ACAGCCTTGG CGGCTCGCAG ATTGCCCTCA AGTCGCAGTC GGTTTCCATC
GGCAGCCGCG TGGTGTTCAT GGGCAGCGGG CCGCTGCTGT ATCTGGTTGC CAGCCAGTAC
GTCAAAGCCG GTGCCGAGGT GGCCGCCGTG CTCGACACTT CACCGTTCAG CAAGCGCATC
GGCGCGATGC CCAAGTTGCT GGCGCGCCCA GGTTTGTTGT TCAACGGCAT GAAACTGCTG
GCGCAGTTGT ACAGCGCCAA CGTGCCGGTG CATCTGGGCG TGCAGCCTGA AGAGATTATG
GGCAGCGAGC AGGACGGCGT GACAGGCGTG CGGGTAAAGC TTGCCAGCGG CAACGTACTG
ACCGTCGATT GCGATGCATT GGCGCTGGGC TACCACCTGC GCCCGGAAAC CCAGCTCGCT
GATCTGGCCG GGTGCCAGTT GCGCTTCGAT GACGCCTCCG GGCAATGGGT GCTGGCCGTC
GATGAAGAAG GCCGCACCTC GGTCAAAGGC GTGTATGCCG CTGGCGACGG CGCGAAGATT
CGCGGTGCCG ATGCGGCCGA GCAGGCCGGT CGGCTGGCGG CGATGGCGTT GCTGGAAGAC
CTCGGCCGGC CTGTGGATAA GTCGCACAGG GAAGCCGTGC GCAAGAACCT GGTGGTTATG
GACCGCTTCC GCGTGGGGCT GGCCGAAGCC TTCCCGTGGC CTGCTGCTCA GGCGGCGGCG
CTGCCTGATG AGGCGATTGT CTGCCGGTGC GAGATGATCA GCGCAGGCGA ATTGCGTGGC
GTGGTGCGTG AAAAGGGCGC GTGCGAAGTC AACCGCGCCA AGGCGTTCAG CCGTGTCGGC
ATGGGCCGCT GTCAGGGCCG CTATTGCTCG CAGGCCGGGG CCGAGGTGAT CGCCGCCGAA
GCCGGTGTGC CGGTCGAGCA GGTGGGTCGG CAGCGCGGTC AGGCACCGGT CAAACCGTTG
TCGATGCTGA TAGACGAGGT GGTGTCATGA
 
Protein sequence
MATSSRLDVH NPGSPRVVII GAGPAGTRCA QTLLAAGIKP ILIDENRRDG GQIYRRQPEG 
FKRDYSALYG TEAAKARDLH ESFDRLRKQI DYRPDTLAWN LTQGELCCAS QGVHSVVEYD
ALILCAGATD RLMPIKGWQL AGTYSLGGSQ IALKSQSVSI GSRVVFMGSG PLLYLVASQY
VKAGAEVAAV LDTSPFSKRI GAMPKLLARP GLLFNGMKLL AQLYSANVPV HLGVQPEEIM
GSEQDGVTGV RVKLASGNVL TVDCDALALG YHLRPETQLA DLAGCQLRFD DASGQWVLAV
DEEGRTSVKG VYAAGDGAKI RGADAAEQAG RLAAMALLED LGRPVDKSHR EAVRKNLVVM
DRFRVGLAEA FPWPAAQAAA LPDEAIVCRC EMISAGELRG VVREKGACEV NRAKAFSRVG
MGRCQGRYCS QAGAEVIAAE AGVPVEQVGR QRGQAPVKPL SMLIDEVVS