Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0254 |
Symbol | |
ID | 1181862 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 275280 |
End bp | 276689 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637391623 |
Product | pyridine nucleotide-disulfide oxidoreductase family protein |
Protein accession | NP_790105 |
Protein GI | 28867486 |
COG category | [R] General function prediction only |
COG ID | [COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCACTT CTTCACGGTT AGACGTTCAT AACCCTGGCA GCCCCAGAGT CGTCATCATT GGCGCGGGCC CGGCCGGCAC CCGCTGTGCG CAAACCCTGC TGGCGGCGGG CATCAAGCCG ATCCTGATCG ACGAAAACCG GCGTGACGGC GGGCAGATCT ATCGCCGCCA GCCCGAAGGC TTCAAGCGTG ATTACTCGGC GCTGTACGGC ACTGAAGCGG CCAAGGCGCG CGACCTGCAC GAGAGCTTCG ACCGCCTGCG CAAACAGATC GACTATCGCC CTGACACGCT GGCCTGGAAC CTCACGCAGG GCGAACTGTG CTGCGCCAGC CAGGGCGTGC ACAGCGTGGT CGAATACGAC GCGCTGATAC TCTGCGCCGG TGCCACCGAC CGTCTGATGC CGATCAAAGG CTGGCAACTG GCGGGCACCT ACAGCCTTGG CGGCTCGCAG ATTGCCCTCA AGTCGCAGTC GGTTTCCATC GGCAGCCGCG TGGTGTTCAT GGGCAGCGGG CCGCTGCTGT ATCTGGTTGC CAGCCAGTAC GTCAAAGCCG GTGCCGAGGT GGCCGCCGTG CTCGACACTT CACCGTTCAG CAAGCGCATC GGCGCGATGC CCAAGTTGCT GGCGCGCCCA GGTTTGTTGT TCAACGGCAT GAAACTGCTG GCGCAGTTGT ACAGCGCCAA CGTGCCGGTG CATCTGGGCG TGCAGCCTGA AGAGATTATG GGCAGCGAGC AGGACGGCGT GACAGGCGTG CGGGTAAAGC TTGCCAGCGG CAACGTACTG ACCGTCGATT GCGATGCATT GGCGCTGGGC TACCACCTGC GCCCGGAAAC CCAGCTCGCT GATCTGGCCG GGTGCCAGTT GCGCTTCGAT GACGCCTCCG GGCAATGGGT GCTGGCCGTC GATGAAGAAG GCCGCACCTC GGTCAAAGGC GTGTATGCCG CTGGCGACGG CGCGAAGATT CGCGGTGCCG ATGCGGCCGA GCAGGCCGGT CGGCTGGCGG CGATGGCGTT GCTGGAAGAC CTCGGCCGGC CTGTGGATAA GTCGCACAGG GAAGCCGTGC GCAAGAACCT GGTGGTTATG GACCGCTTCC GCGTGGGGCT GGCCGAAGCC TTCCCGTGGC CTGCTGCTCA GGCGGCGGCG CTGCCTGATG AGGCGATTGT CTGCCGGTGC GAGATGATCA GCGCAGGCGA ATTGCGTGGC GTGGTGCGTG AAAAGGGCGC GTGCGAAGTC AACCGCGCCA AGGCGTTCAG CCGTGTCGGC ATGGGCCGCT GTCAGGGCCG CTATTGCTCG CAGGCCGGGG CCGAGGTGAT CGCCGCCGAA GCCGGTGTGC CGGTCGAGCA GGTGGGTCGG CAGCGCGGTC AGGCACCGGT CAAACCGTTG TCGATGCTGA TAGACGAGGT GGTGTCATGA
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Protein sequence | MATSSRLDVH NPGSPRVVII GAGPAGTRCA QTLLAAGIKP ILIDENRRDG GQIYRRQPEG FKRDYSALYG TEAAKARDLH ESFDRLRKQI DYRPDTLAWN LTQGELCCAS QGVHSVVEYD ALILCAGATD RLMPIKGWQL AGTYSLGGSQ IALKSQSVSI GSRVVFMGSG PLLYLVASQY VKAGAEVAAV LDTSPFSKRI GAMPKLLARP GLLFNGMKLL AQLYSANVPV HLGVQPEEIM GSEQDGVTGV RVKLASGNVL TVDCDALALG YHLRPETQLA DLAGCQLRFD DASGQWVLAV DEEGRTSVKG VYAAGDGAKI RGADAAEQAG RLAAMALLED LGRPVDKSHR EAVRKNLVVM DRFRVGLAEA FPWPAAQAAA LPDEAIVCRC EMISAGELRG VVREKGACEV NRAKAFSRVG MGRCQGRYCS QAGAEVIAAE AGVPVEQVGR QRGQAPVKPL SMLIDEVVS
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