| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0251 |
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| Symbol | |
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| ID | 1181859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 272272 |
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| End bp | 273150 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637391620 |
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| Product | peptide ABC transporter, permease protein |
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| Protein accession | NP_790102 |
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| Protein GI | 28867483 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCAAT TCATTGCGAA ATCGACGCCT GCCGCGCCGG AACCGGTGCT GCGCAAAAAA
GCGTCCCGCC CGACTTCCTG GCTGGGCCTG CTGGGCGCAA CGGTGTGCTT TCTCTGGCTG
ATGGTCGCGT TGTTCGGCCC TTGGCTTGCG CCGCACCCGG TTGGCGAAGT GGTGTCCGAC
AACATGTTTG AAAACATGAG CGCGGTCTAC CCGTTCGGCA CCGATTACCT GGGCCGCGAC
ATGCTCAGCC GGGTGCTGGT CGGCGCAAAA TTTACGGTGG GCCTGGCGTT GATCTCGGCG
GTACTGGCCA GTGGTATCGG CACCCTGTGT GCGCTGCTGT CGGTGGTTGC GCCGAAATGG
CTGGATGAAA TCATCAGCCG CCTGATGGAC GCCTTTATCT CGATCCCGAG CAAGATGCTG
GCGCTGATCA TGGTGTCGGC GTTCGGTTCG TCCGAAGTGC TGCTGATCTG TACGGCGGTG
CTGAGCTACT CGCCGGGGGC GTTTCGTATC GCGCGCAGCC TGGCGGTGAA CATCGAGGCG
CTGGAATACG TGCAAGTGGC GCGTACCCGT GGTGAAGGCC GCGTGTACAT CGCCTGCCGG
GAGATTCTGC CGAACATGCT CAACCCGGTT CTGACCGACC TGGGCCTGCG TTTTGGTTTC
ATCGTGTTGC TGCTCAGCGG CATGAGTTTT CTCGGGCTCG GTGTGCAACC CCCCGATGCC
GACCTCGGTT CGCTGGTGCG GGAAAACATC GGCGGGCTCA GCCAGGGCGC GCCAGCCATC
GTGATTCCGG CGCTGGCGAT CGGCACGCTG ACCATCGGCG TCAACCTGTT CATCGACCGG
CTGGCCTCAC GGCGCGGTCG TCGTTCGGGA GGGCATTGA
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| Protein sequence | MTQFIAKSTP AAPEPVLRKK ASRPTSWLGL LGATVCFLWL MVALFGPWLA PHPVGEVVSD
NMFENMSAVY PFGTDYLGRD MLSRVLVGAK FTVGLALISA VLASGIGTLC ALLSVVAPKW
LDEIISRLMD AFISIPSKML ALIMVSAFGS SEVLLICTAV LSYSPGAFRI ARSLAVNIEA
LEYVQVARTR GEGRVYIACR EILPNMLNPV LTDLGLRFGF IVLLLSGMSF LGLGVQPPDA
DLGSLVRENI GGLSQGAPAI VIPALAIGTL TIGVNLFIDR LASRRGRRSG GH
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