| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0248 |
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| Symbol | |
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| ID | 1181856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 268284 |
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| End bp | 269558 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637391617 |
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| Product | oxidoreductase, FAD-binding protein |
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| Protein accession | NP_790099 |
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| Protein GI | 28867480 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCAGTG AGTCTTACTG GCTCGACACA GCTCCGGATT TCACCGGCGC GCAGGATGGC
GCAGTGGAGG GGCAAGCTGA CGTTGTGGTG GTCGGTGGCG GCTTTACCGG CCTTGCGGCG
GCGCGTGCAT TGGCCTTGAA AGGTGCCAGC GTGGTGGTTC TGGAGGCGGG CCGGGTGATC
GGCGAAGCCT CTGGCCGCAA CGGTGGGCAG TGCAACACCG GCGTGGCTCA GGATTACGCG
TCATTGAGCG CGACCCTGGG TGCTGATCAG GCCCGCGAGT ATTACAAGGC GTATGAAAGT
GCCGTTCAGA GCGTTGTCAC AGTGGTCGAG CAGGAAAGCA TTGCCTGCGA CATCAAGCGC
AACGGCAAGC TCAAACTGGC CGCCAAACCG GGGCATTACG AAGGACTGGC GCGCACCTGC
GAGCTGATTC GTCGTGAGGT CGATGCCGAT GTCGAACTGC TGTCGGCTCA GGACGTGCGC
AGCGAAATCG ATTCAAACGA ATTTCACGGC GGCCTGCTGC AGCGCAACGG CGTGCAGATG
CACGTGGGCC GCTTTGGCCT GGGCCTGGCC GATGCCGCCG TGCGTCATGG CGCACGTGTG
TACCAGGACG CTACGGTCAA GGACTGGAAA GCCAACCGTG GAGGTTTTGT GGTCAACACC
TCCAAGGGGT CTATTCAGGC CGGGCAGGTG TTGCTGGCGA CCGGCGCCTG CCAGCATGGC
GGGTTGGGCT GGTATCGCCG ACGCATCGTG CCGGTCGGCA GTTTCGTGAT CGTCACCGAA
GTGTTGCCGC AGGCGCTGAT CAACCAGCTG TTCCCTCATC AGCGCGCTTA CGTGACCAGC
CGTCTTATCG GCAACTACTT CCGCCTCACC CCGGACAACC GCCTGCTGTT CGGCGGCCGG
GCGCGCTTTG CCATGTCCAA CAGCAGCTCC GATGCCAAGA GCGGCAAGGT GCTGCAAGCG
GCGATGGTAC AGATGTTTCC GCAACTGGCC CACGTCAAGG TCGACTACTG CTGGGGCGGT
CTGGTGGACA TGACGTCCGA CCGTTTGCCG CGTGCAGGCG AGCACAACGG TGTTTTCTAT
TCCATGGGCT ACAGCGGGCA TGGCGTGCAG ATGTCGGTGC ACATGGGGCA GGTGATGGCC
GAGGTCATGG AAGGCAAGGC GCAGGCCAAC CCCTGGAAAG ACCTGAACTG GCCAGCGATT
CCCGGCCACT TCGGCAAGCC CTGGTTTCTG CCCCTGGTAG GCGCTTACTA CCGCTATCAG
GACAGCCGCC ACTGA
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| Protein sequence | MRSESYWLDT APDFTGAQDG AVEGQADVVV VGGGFTGLAA ARALALKGAS VVVLEAGRVI
GEASGRNGGQ CNTGVAQDYA SLSATLGADQ AREYYKAYES AVQSVVTVVE QESIACDIKR
NGKLKLAAKP GHYEGLARTC ELIRREVDAD VELLSAQDVR SEIDSNEFHG GLLQRNGVQM
HVGRFGLGLA DAAVRHGARV YQDATVKDWK ANRGGFVVNT SKGSIQAGQV LLATGACQHG
GLGWYRRRIV PVGSFVIVTE VLPQALINQL FPHQRAYVTS RLIGNYFRLT PDNRLLFGGR
ARFAMSNSSS DAKSGKVLQA AMVQMFPQLA HVKVDYCWGG LVDMTSDRLP RAGEHNGVFY
SMGYSGHGVQ MSVHMGQVMA EVMEGKAQAN PWKDLNWPAI PGHFGKPWFL PLVGAYYRYQ
DSRH
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