| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0247 |
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| Symbol | dehII |
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| ID | 1181855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 267549 |
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| End bp | 268217 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637391616 |
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| Product | haloacid dehalogenase, type II |
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| Protein accession | NP_790098 |
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| Protein GI | 28867479 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II
[TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCTTTC TTCGACCAAA ATTCATTACG TTCGACTGCT ACGGCACGTT GACCAACTTC
CACATGGGCA CCATGACGCG CGAGATCTTC GCCGACCGCG TTCCGGCTGA ACAGATGGAT
CAGTTTGTCA GGGACTTCTC GGCGTATCGT CTGGATCAGG TCATGGGTGA CTGGATGCCA
TACGACGAAA TCCTGAAAGT GGCACTGGCT CGCACCTGCA AGCGCTGGAA TGTTGAATAC
CGCGAGGAAG GCCAGCTGTA TTACGACGCT GTGCCGACTT GGGGTCCGCA CGCCGACGTG
CCGGCCGGTC TGTCGAAAAT TGCCGACAAG ATCCCGCTGG TGATTTTCTC CAACGCCAGC
GACAGCCAGA TCATGTCCAA CGTCGAAAAG CTCGGCGCGC CATTCCACAA GGTGTTCACC
GCTGATCAGG CCAAGGTCTA CAAACCACGT CTGGCGGCCT TCGAGTTCAT GCTCGACAAC
CTCGGTTGCG GCCCGGAAGA CATCTTGCAT GTGTCTTCAA GCTTCCGTTA CGACCTGTTC
TCCGCACACG ACATGAAAAT CAAGAACAAG GCTTTCGTGG CGCGTGGTCA TGAACAGCCA
GCCAATAGCT TCTACGAGTA CCACCAGATC CCGGACATCG GCGGGCTGGC CGGGCTGGTC
GGTCTTTAA
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| Protein sequence | MSFLRPKFIT FDCYGTLTNF HMGTMTREIF ADRVPAEQMD QFVRDFSAYR LDQVMGDWMP
YDEILKVALA RTCKRWNVEY REEGQLYYDA VPTWGPHADV PAGLSKIADK IPLVIFSNAS
DSQIMSNVEK LGAPFHKVFT ADQAKVYKPR LAAFEFMLDN LGCGPEDILH VSSSFRYDLF
SAHDMKIKNK AFVARGHEQP ANSFYEYHQI PDIGGLAGLV GL
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