Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0238 |
Symbol | hslO |
ID | 1181846 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 258156 |
End bp | 259058 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637391607 |
Product | chaperonin, 33 kDa |
Protein accession | NP_790089 |
Protein GI | 28867470 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1281] Disulfide bond chaperones of the HSP33 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATGATT TCCCGGACAT CGATTTCACC CAGCGTTTTA TCTTCGACGA AAGCGACGTA CGCGGAGAGC TGGTAGCCCT GGAGCGCAGC TACGCCGAAG TGCTTGCCAA ACACCCCTAC CCGGAGCCGG TCGCGCAACT GCTCGGCGAA CTGATGGCGG CCGCGGCCCT GCTGGTCGGC ACCCTCAAGT TCGACGGCTT GCTGATTCTG CAGGCGCGCT CCAGCGGCGC CGTACCATTG CTGATGGTCG AGTGCTCAAG CGAGCGCGAG CTGCGTGGCA TTGCCCGTTA CGACGAAGCG CTGATCACCC CTGGCGCCGG CCTGCAGGAC CTGATGCCGG ACGGCTCGCT GGCATTGACC GTCGACCCGC GTCAGGGCAA GCGCTATCAG GGCATCGTGG CGCTGGACGG CGTCGACCTG TCGGAAAGCC TCTCCAACTA CTTCGTGATG TCCGAACAGC TGGGCACCCG CTTCTGGCTC AAGGCTGACG GTCATCGCGC CCGTGGCCTG CTGCTGCAAC AACTGCCCGC CGCCCAGATC ACCGACCCGG AAGAACGCGA CGCCAGCTGG GAGCACGTCG TTACCCTGGC CAGCACCCTG ACGGCCGAAG AAATGCTCAG CCTGGACAAC CAGACCGTGC TGCATCGCCT GTATCACGAA GACCCGGTGC GCCTGTTCGA TGTCCAGCCA ATCTGCTTTC GCTGCAGTTG CTCACGCGAG CGCTCGGCCA ATGCGCTGGC CAGCCTTGGG CTGGAGGACG CGCAGCAACT GGTTATCGAG CACAACGGCA GCATCGAGAT CGACTGCCAG TTCTGCAACG AGCGCTACCT GTTCGATGCC ACTGACGTTG CGCAGCTGTT TGCTGGCGGC GGTGTCGATT CGCCATCTGA TACGCGTCAT TAA
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Protein sequence | MHDFPDIDFT QRFIFDESDV RGELVALERS YAEVLAKHPY PEPVAQLLGE LMAAAALLVG TLKFDGLLIL QARSSGAVPL LMVECSSERE LRGIARYDEA LITPGAGLQD LMPDGSLALT VDPRQGKRYQ GIVALDGVDL SESLSNYFVM SEQLGTRFWL KADGHRARGL LLQQLPAAQI TDPEERDASW EHVVTLASTL TAEEMLSLDN QTVLHRLYHE DPVRLFDVQP ICFRCSCSRE RSANALASLG LEDAQQLVIE HNGSIEIDCQ FCNERYLFDA TDVAQLFAGG GVDSPSDTRH
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