| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0233 |
|---|
| Symbol | gltP |
|---|
| ID | 1181841 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | - |
|---|
| Start bp | 253459 |
|---|
| End bp | 254790 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637391602 |
|---|
| Product | proton/glutamate symporter |
|---|
| Protein accession | NP_790084 |
|---|
| Protein GI | 28867465 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAGG CAAAGCTGAG CCTGGCCTGG CAGATTCTTA TCGGGCTGGT ACTGGGCGTC
GCGGTGGGAG CACTGCTCAA CCATTTCGGT GACGAGAAAG CCTGGTGGAT CAGTAATATC
CTGCAGCCCG CGGGCGACAT TTTCATTCGT CTGATCAAGA TGATCGTTAT TCCTATCGTG
GTCGCATCGC TGATTGTCGG CATCGCGGGG ATGGGCGACG CGAAGAAGCT GGGGCGCATT
GGCCTCAAGA CCATTCTTTA CTTTGAAGTC GTGACCACCA TCGCCATCCT GGTGGGTCTG
GTGCTGGCCA ACGTGTTCCA TCCGGGCACT GGCATCGACA TGAGCACCCT GGGGACGGTC
GATATCTCCA AGTATCAGCA GACCACCGCT GAGGTTCAGC ACGATCACGC CTTTGTTGCG
ACCATCCTCA ACCTGATCCC GTCCAATATC TTCGCCGCCA TGACCCGTGG CGAGATGCTG
CCGATCATTT TCTTCTCGGT GCTGTTCGGC CTGGGGCTTT CGAGCCTGCA AGCCGAGGTG
CGCGAGCCGC TGGTCAAGCT GTTCCAGGGC GTTTCGGAAA CCATGTTCAA GGTCACTCAC
ATGATCATGA ACTACGCACC GATTGGCGTA TTCGCCCTGA TTGCGGTGAC GGTCGCCAAC
TTCGGTTTCG CGTCGCTGCT GCCGCTCGCC AAGCTGGTGA TTCTGGTTTA CGTGGCCATC
GCCTTCTTCG CCTTCGTGGT GCTGGGGCTG ATCGCTCGGG CATTCGGCTT TTCGGTCATC
AAGCTGATGC GTATCTTCAA GGACGAGCTG ATTCTGTCCT ACTCCACCGC CAGTTCCGAA
ACCGTGCTGC CGCGCGTGAT TCAGAAGATG GAAGCCTACG GCGCGCCGAA AGCGATCTGC
AGTTTCGTGG TACCCACCGG CTACTCGTTC AACCTCGACG GTTCGACGCT TTATCAGAGC
ATTGCAGCGA TATTCATTGC CCAGCTGTAC GGCATTGACC TGTCGATCAG TGCGCAATTG
ATGCTGGTAG TGACGCTGAT GGTCACCTCC AAGGGCATCG CAGGCGTGCC GGGCGTGTCC
TTCGTCGTGC TGCTGGCGAC ACTGGGCAGC GCGGGCATTC CGCTGGAAGG CCTGGCGTTC
ATTGCCGGTG TCGACCGGAT CATGGACATG GCACGTACGG CCCTGAATGT GATCGGCAAT
GCGCTGGCCG TGCTGGTCAT CTCGCGCTGG GAAGGCCTGT ACGACGACGC CAAAGGCGAA
CGCTACTGGA ACTCCCTGCC GCACTGGCGC AGCAAGGAAT CTGTTGCGCT GGGTCAACCG
ACAGCGGATT GA
|
|---|
| Protein sequence | MKKAKLSLAW QILIGLVLGV AVGALLNHFG DEKAWWISNI LQPAGDIFIR LIKMIVIPIV
VASLIVGIAG MGDAKKLGRI GLKTILYFEV VTTIAILVGL VLANVFHPGT GIDMSTLGTV
DISKYQQTTA EVQHDHAFVA TILNLIPSNI FAAMTRGEML PIIFFSVLFG LGLSSLQAEV
REPLVKLFQG VSETMFKVTH MIMNYAPIGV FALIAVTVAN FGFASLLPLA KLVILVYVAI
AFFAFVVLGL IARAFGFSVI KLMRIFKDEL ILSYSTASSE TVLPRVIQKM EAYGAPKAIC
SFVVPTGYSF NLDGSTLYQS IAAIFIAQLY GIDLSISAQL MLVVTLMVTS KGIAGVPGVS
FVVLLATLGS AGIPLEGLAF IAGVDRIMDM ARTALNVIGN ALAVLVISRW EGLYDDAKGE
RYWNSLPHWR SKESVALGQP TAD
|
|---|
| |