| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0218 |
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| Symbol | amt-1 |
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| ID | 1181826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 240728 |
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| End bp | 242065 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637391587 |
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| Product | ammonium transporter |
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| Protein accession | NP_790069 |
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| Protein GI | 28867450 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0004] Ammonia permease |
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| TIGRFAM ID | [TIGR00836] ammonium transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCTGC GTCAATTCGC AGGGCTCGGT GCCCTGTTGT CCCTCGCAAT ACCTGGTCTT
GCCCTGGCGG CTGACCCAGT GGCCGAGCCG GTGCTGAACT CTGGCGACAC CGCATGGATG
CTGACCGCGA CCGCTCTGGT CCTGTTCATG ACCATTCCCG GTCTCGCGCT GTTCTACGGC
GGCATGGTCC GTTCAAAAAA CATCCTGTCC GTGATGATGC AGTGTTTCGC CATCACCGGC
CTGATCAGCA TCCTGTGGGT CGTTTACGGT TACAGCATCG CGTTTGACAC AACCGGTATG
GAAGCTGGCG TCGTCAACTT CAATTCCTTC TTTGGCGGTA TGGGTAAAGC GTTCCTGGCG
GGTATCACGC CTGCAAGCCT TACCGGTCCT GCTGCATTGT TCCCTGAGGC GGTGTTCGTC
ACCTTTCAGA TGACCTTTGC GATCATCACT CCAGCCCTGA TCGTCGGTGC TTTCGCAGAA
CGCATGAAGT TCTCCGCGAT GCTGATTTTC ATGGGTATCT GGTTCACGCT GGTCTACGCG
CCAATTGCCC ATATGGTCTG GGGCGGCGTC GGTGGCTTGA TGTGGGACTG GGGCGTTCTG
GACTTCGCAG GTGGCACCGT GGTGCACATC AACGCCGGTG TAGCCGGTCT GGTGGCTTGC
CTGGTACTGG GCAAGCGCAA AGGCTTCCCG ACCACCCCGA TGGCTCCGCA CAATCTGGGT
TACACCCTGA TCGGCGCAGC GATGCTCTGG GTTGGCTGGT TCGGTTTCAA CGCCGGTTCC
GCCGCTGCGG CCAACGGCAC TGCCGGTATG GCGATGCTGG TGACGCAAAT CGCTACCGCT
GCCGCCGCGC TGGGCTGGAT GTTCGCCGAG TGGCTGACGC ACGGTAAGCC AAGTGCGCTG
GGCATCGCTT CGGGTGTGGT TGCCGGTCTG GTTGCCATCA CCCCGGCGGC CGGTACAGTT
GGCCCGATGG GCGCGCTGAT CATCGGTCTG GCGGCAGGCG TGATCTGCTT CTTCTGCGCC
ACCAGCCTCA AGCGCAAGCT TGGCTACGAT GACTCCCTGG ATGCGTTCGG CGTTCACGGT
ATCGGCGGTA TCGTCGGCGC GATCCTGACC GGTGTGTTCG CAGCACCTGC ACTGGGCGGC
TTCGGCACGG TGACTGACAT CGGTGCTCAA GTCTGGATTC AGTTCAAGGG CGTCGCGTTC
ACCGTCGTCT ACACCGCGAT CGTGACCTTC ATCATCCTCA AGGTACTGGA TGCAGTGATG
GGTCTGCGGG TTACCGACGA GGAAGAGTCT GTCGGTCTGG ACCTTGCGCA ACACAACGAG
CGTGGCTACA ACTTGTAA
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| Protein sequence | MTLRQFAGLG ALLSLAIPGL ALAADPVAEP VLNSGDTAWM LTATALVLFM TIPGLALFYG
GMVRSKNILS VMMQCFAITG LISILWVVYG YSIAFDTTGM EAGVVNFNSF FGGMGKAFLA
GITPASLTGP AALFPEAVFV TFQMTFAIIT PALIVGAFAE RMKFSAMLIF MGIWFTLVYA
PIAHMVWGGV GGLMWDWGVL DFAGGTVVHI NAGVAGLVAC LVLGKRKGFP TTPMAPHNLG
YTLIGAAMLW VGWFGFNAGS AAAANGTAGM AMLVTQIATA AAALGWMFAE WLTHGKPSAL
GIASGVVAGL VAITPAAGTV GPMGALIIGL AAGVICFFCA TSLKRKLGYD DSLDAFGVHG
IGGIVGAILT GVFAAPALGG FGTVTDIGAQ VWIQFKGVAF TVVYTAIVTF IILKVLDAVM
GLRVTDEEES VGLDLAQHNE RGYNL
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