| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0185 |
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| Symbol | glyS |
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| ID | 1181793 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 207778 |
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| End bp | 209832 |
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| Gene Length | 2055 bp |
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| Protein Length | 684 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637391562 |
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| Product | glycyl-tRNA synthetase, beta subunit |
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| Protein accession | NP_790044 |
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| Protein GI | 28867425 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
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| TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGCTC AAGATTTTCT GGTTGAACTG GGCACCGAAG AACTGCCACC CAAGACCCTC
GTGTCGCTGG CAGATGCTTT TCTCGCCGGT ATTGAAAAAG GCCTTGCGGG CGCAGGTCTG
ACCTATAGCG CCAAACAGGT CTACGCCGCG CCGCGTCGCC TGGCCGTGCT GATCACCGCA
CTGGCCACGC AACAGCCGGA TCGCAGCGTG AACCTGGACG GCCCGCCGCG TCAGGCCGCG
TTCGACGCTG ACGGCAACCC GACTCAGGCA GCTTTGGGCT TCGCCAAGAA GTGCGGCGTC
GACCTGAGCG AAATCGATCA GAGCGGCCCG AAACTGCGCT ACAGCCAGAC CATTCTCGGC
AAGCCGACCA CCTCGCTGCT GCCGACCATT GTCGAAGACT CGTTGAACGA CCTGCCGATT
GCCAAGCGCA TGCGCTGGGG CGCTCGCAAG GAAGAGTTCG TACGGCCGAC CCAGTGGTTG
GTGATGCTGT TCGGCGATCA GGTGGTGGAC TGCACGATTC TCGCCCAGAG CGCCGGTCGT
CATTCTCGCG GCCACCGCTT CCATCACCCG GAAGACGTGC GTATTTCTTC GCCTGCCGGC
TACCTCAGCG ACCTGCGCGC AGCTAATGTT CTGGCCGACT TCAACGAACG TCGCCAGATC
ATCAGCAAGC GCGTCGAAGA GCTGGCCAGC CAACAGGAAG GCACCGCCAT CGTGCCGCCA
AGCCTGCTGG ATGAAGTGGC CGGGCTGGTC GAGTGGCCGG TTCCACTGGT GTGTTCGTTC
GAAGAGCGTT TCCTTGATGT GCCTCAGGAA GCCCTGATCA CCACCATGCA GGACAACCAG
AAGTATTTCT GCCTGCTGGA TGCCGACGGC AAGTTGCTGC CGCGCTTCAT CACGGTGGCC
AACATCGAGA GCAAGGACCC GGCCCAGATC ATCGCCGGTA ATGAGAAGGT GGTTCGTCCA
CGCCTGACCG ACGCCGAATT CTTCTTCAAG CAGGACAAGA AGCAGAAGCT GGAAACCTTC
AACGATCGCC TGAAAAACGT CGTGTTCCAG GCCCAATTGG GCAGCGTGTT CGACAAGGCC
GAGCGCGTCT CGAAGCTTGC CGCCTACATC GCACCCCGCA TCGGCGGCGA CGCCCAGCGT
GCGGCACGTG CCGGGCTGTT GTCCAAGTGC GATCTGTCGA GTGAAATGGT TGGCGAGTTC
CCGGAAATGC AGGGCATTGC TGGTTACTAC TACGCCAAGG CCGATGGCGA GGCAGAAGAT
GTCGCGCTGG CGCTCAACGA GCAGTACATG CCGCGTGGCG CAGGTGCTGA GCTGCCGACC
ACGCTGACCG GTGCGGCAGT TGCCATCGCT GACAAGCTCG ACACGCTGGT CGGTATTTTC
GGTATCGGCA TGCTGCCCAC CGGCAGCAAA GACCCGTATG CCTTGCGTCG TGCGGCGCTG
GGTATCCTGC GGATCCTGAT CGAGAAGAAG CTGGACCTGA ACCTGGTCGA GACCGTGAAG
TTCGCGGTCA CGCAGTTCGG TGCCAAGGTC AAGCCCGCAG GGCTGGCTGA GCAGGTGCTG
GAATTCATCT TCGACCGTCT GCGTGCGCGT TACGAAGACG AAGGCGTCGA AGTGGCGGTA
TATCTCTCGG TGCGTGCCTT GCAGCCCGCC TCGGCGCTTG ATTTCGATCA GCGCGTTCAG
GCGGTGCAGG CTTTCCGCAA ACTGCCGCAA GCCGCCGCAC TGGCTGCCGT GAACAAGCGC
GTATCGAACC TGCTGAGCAA GGCCGAGGGC AGCATTGCCC AGACCGTCGA GCCCAAGTAC
TTCGACAACG CCAACGAGTT CTCGCTGTAC TCGGCAATCC AGCAGGCTGA TCATGCGGTC
CAGCCAATGG CTGCCGAGCG TCAGTACAGC GAATCGCTGG CGCGTCTGGC GATGCTGCGC
GAGCCGGTCG ATGCGTTCTT TGAAGCGGTG ATGGTCAACG CGGAAGACGC CAATGTGCGC
GCCAACCGTT ATGCCTTGCT GGCGCGCTTG CGCGGCCTGT TCCTCGGCGT TGCCGATATC
TCGCTGCTGG GCTGA
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| Protein sequence | MSAQDFLVEL GTEELPPKTL VSLADAFLAG IEKGLAGAGL TYSAKQVYAA PRRLAVLITA
LATQQPDRSV NLDGPPRQAA FDADGNPTQA ALGFAKKCGV DLSEIDQSGP KLRYSQTILG
KPTTSLLPTI VEDSLNDLPI AKRMRWGARK EEFVRPTQWL VMLFGDQVVD CTILAQSAGR
HSRGHRFHHP EDVRISSPAG YLSDLRAANV LADFNERRQI ISKRVEELAS QQEGTAIVPP
SLLDEVAGLV EWPVPLVCSF EERFLDVPQE ALITTMQDNQ KYFCLLDADG KLLPRFITVA
NIESKDPAQI IAGNEKVVRP RLTDAEFFFK QDKKQKLETF NDRLKNVVFQ AQLGSVFDKA
ERVSKLAAYI APRIGGDAQR AARAGLLSKC DLSSEMVGEF PEMQGIAGYY YAKADGEAED
VALALNEQYM PRGAGAELPT TLTGAAVAIA DKLDTLVGIF GIGMLPTGSK DPYALRRAAL
GILRILIEKK LDLNLVETVK FAVTQFGAKV KPAGLAEQVL EFIFDRLRAR YEDEGVEVAV
YLSVRALQPA SALDFDQRVQ AVQAFRKLPQ AAALAAVNKR VSNLLSKAEG SIAQTVEPKY
FDNANEFSLY SAIQQADHAV QPMAAERQYS ESLARLAMLR EPVDAFFEAV MVNAEDANVR
ANRYALLARL RGLFLGVADI SLLG
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