Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0180 |
Symbol | trkA |
ID | 1181788 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 201325 |
End bp | 202698 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637391557 |
Product | Trk system potassium uptake protein TrkA |
Protein accession | NP_790039 |
Protein GI | 28867420 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0569] K+ transport systems, NAD-binding component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAGATCA TCATTCTGGG TGCGGGTCAG GTGGGCGGTA CACTGGCCGA GCATCTGGCG GGCGAAGCCA ACGACATCAC CGTGGTCGAC ACCGACGGCG ACCGCTTGCG CGATCTGGGT GATCGCCTGG ACATCCGCAC CGTGCAGGGC AAAGGCTCGT ATCCGGCGGT GCTGCGCCAG GCAGGTGCCG ACGACGCTGA CATGCTGGTC GCCGTGACCA GCAGCGACGA AGCCAACATG ATCGCCTGCC AGGTGGCCCA CACGCTGTTT CACACACCGA CCAAGATCGC GCGCATCCGT GAAGCGGCGT ACCTGACCCG CGCAGGCCTG TTCGACAAGA ACGCGATTCC GGTCGACGTG CTGATCAGCC CGGAACAGGT GGTCACCAAT TACATCAAGC GCCTGATCGA GTACCCCGGC GCGCTTCAGG TAATCGATTT CGCCGAAGGC AAGGCGCAGC TGGTCGCGGT CAAAGCCTAT TACGGCGGGG CGCTTGTCGG TCAGCAACTG CGCCAGCTGC GCGCGCACAT GCCTAACGTC GATACCCGTA TCGCAGCGAT CTACCGGCGC GACCGGGCGA TCCTGCCCAA AGGCGATACG GTCATCGAAG CCGACGACGA GGTATTTTTC ATCGCCGCCA GGGCTGATAT TCGTGCGGTG ATGGGCGAGC TGAGGCGTCT GGACGAGAAC TACAAACGCA TCGTCATCGC CGGCGGCGGC AACATCGGCG AGCGTCTGGC CGAAGCCATC GAAAGCCGTT ATCAGGTCAA GATCATCGAA GTGAACCCGG CGCGCTGCCG CTACCTGTCG GAGAACCTCG ACAGTACCGT GGTGCTGCAG GGTAGCTCAT CGGACCGCGA CCTGCTGCTG GAAGAAAACA TCGGTAACAC CGACCTGTTT CTGGCGCTGA CCAACGACGA CGAAGCCAAC ATCATGTCGT CACTGCTGGC CAAACGGCTG GGCGCACGCA AGGTGATGAC GCTGATCAAC AACCCGGCCT ACGTTGATCT GGTCCAGGGC GGCGAGATTG ACGTCGCGGT CAGCCCGCAA CTGGCAACCA TCGGCACATT GCTGGCCCAC GTACGCCGGG GCGATATCGT CAGCGTTCAC TCTCTAAGGC GTGGCGCTGC CGAGGCCATT GAGATCGTTG CCCACGGCGA CCCGAAATCC AGCAAGGTGG TCGGTCGCGC CATCAAGGAC ATCAACCTGC CGACCGGTAC GGCGATTGGC GCGATCATCC GCGACGAACA GGTCCTCATC GCCCACGACG TCACCCTGAT CGAATCCGGC GACCACGTGA TCATGTTTCT TGTGGATAAA AAGTGCATTC GCGATGTGGA GCGGCTGTTT CAGGTAGGCC TGAGCTTTTT CTGA
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Protein sequence | MKIIILGAGQ VGGTLAEHLA GEANDITVVD TDGDRLRDLG DRLDIRTVQG KGSYPAVLRQ AGADDADMLV AVTSSDEANM IACQVAHTLF HTPTKIARIR EAAYLTRAGL FDKNAIPVDV LISPEQVVTN YIKRLIEYPG ALQVIDFAEG KAQLVAVKAY YGGALVGQQL RQLRAHMPNV DTRIAAIYRR DRAILPKGDT VIEADDEVFF IAARADIRAV MGELRRLDEN YKRIVIAGGG NIGERLAEAI ESRYQVKIIE VNPARCRYLS ENLDSTVVLQ GSSSDRDLLL EENIGNTDLF LALTNDDEAN IMSSLLAKRL GARKVMTLIN NPAYVDLVQG GEIDVAVSPQ LATIGTLLAH VRRGDIVSVH SLRRGAAEAI EIVAHGDPKS SKVVGRAIKD INLPTGTAIG AIIRDEQVLI AHDVTLIESG DHVIMFLVDK KCIRDVERLF QVGLSFF
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