Gene PSPTO_0173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0173 
Symbolqor 
ID1181781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp194503 
End bp195480 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content63% 
IMG OID637391550 
Productquinone oxidoreductase 
Protein accessionNP_790032 
Protein GI28867413 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAGC GTATCCAGTT CAGCACTGTC GGAGGACCCG AGGTTCTTGA ATATGTCGAT 
TTCGAGCCAG AGGCTCCGGG GCCGCAGGCG GTGGTTGTGC GCAACAAGGC TATCGGCTTG
AATTTCATCG ATACCTATTA CCGCAGCGGG TTGTATCCCG CGCCGTTCTT GCCATCCGGT
CTCGGCGCCG AGGGGGCGGG TGTGGTCGAG GCGGTGGGCG ATGAGGTGAC GCGCTTCAAG
GTGGGCGACC GGGTTGCCTA TGGCACCGGG CCGCTGGGCG CGTACAGCGA GGTGCACGTG
CTGCCTGAGG CGAATCTGGT CAAGCTGGCG GACTCGGTCA GTTTCGAGCA GGCCGCGGCG
CTGATGCTCA AGGGCCTGAC CGTGCAATAC CTGTTGCGCC AGACTTATCA GGTGAAGCCG
GGCGAGATCA TTCTGTTTCA TGCCGCTGCA GGCGGTGTCG GCTCGCTGGC CTGCCAATGG
GCCAAGGCAC TGGGTGCCAA GTTGATCGGC ACGGTCAGTT CGCCAGAGAA AGCGGCGCAC
GCCAAGGCAC TCGGTGCCTG GGAAACCATC GACTACAGCC ACGAGGACGT CGCCAAGCGT
GTGCTGGAGC TGACCGACGG CAAGAAATGC CCGGTGGTCT ACGACGGCGT GGGGCAGGAC
ACCTGGCTGA CTTCGCTCGA CAGCGTGGCG CCGCGTGGGC TGGTGGTGAG TTTCGGGAAT
GCATCAGGGC CGGTGTCAGG CGTGAACCTG GGCATTCTGG CGCAGAAGGA TTCGGTGTAT
GTCACCCGCC CGACGTTGGG CAGCTACGCC AACAACGCAC AAAACCTGCA AACGATGGCC
GATGAGCTGT TCGACATGCT CGCCAGTGGC AAGCTCAAGG TCGATGGCAT TGAGCAGTAC
GCCCTCAAGG ACGCCGCCAA GGCGCAGATT GAGCTCTCGG CGCGGCGCAC CACTGGCTCG
ACCATCCTGA TTCCTTGA
 
Protein sequence
MAKRIQFSTV GGPEVLEYVD FEPEAPGPQA VVVRNKAIGL NFIDTYYRSG LYPAPFLPSG 
LGAEGAGVVE AVGDEVTRFK VGDRVAYGTG PLGAYSEVHV LPEANLVKLA DSVSFEQAAA
LMLKGLTVQY LLRQTYQVKP GEIILFHAAA GGVGSLACQW AKALGAKLIG TVSSPEKAAH
AKALGAWETI DYSHEDVAKR VLELTDGKKC PVVYDGVGQD TWLTSLDSVA PRGLVVSFGN
ASGPVSGVNL GILAQKDSVY VTRPTLGSYA NNAQNLQTMA DELFDMLASG KLKVDGIEQY
ALKDAAKAQI ELSARRTTGS TILIP