| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0170 |
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| Symbol | hemF |
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| ID | 1181778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 190442 |
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| End bp | 191356 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637391547 |
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| Product | coproporphyrinogen III oxidase, aerobic |
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| Protein accession | NP_790029 |
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| Protein GI | 28867410 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0408] Coproporphyrinogen III oxidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTACCC GTACCGAGGC CGTAAAAGCC TACCTGCTCG ACCTGCAAGA CCGTATCTGC
ACCGCGCTCG AGCAGGAAGA TGGCAACGCA CACTTCGTGG AAGATGCCTG GACACGTCCG
GCGGGCGGCG GTGGTCGCAC GCGGGTGGTC GAGAATGGCG CGGTCATCGA GAAAGGCGGC
GTCAACTTTT CCCATGTGTT CGGCAGCAAC CTGCCGCCGT CAGCCAGTGC GCATCGGCCT
GAATTGGCCG GGCGTGGTTT CGAGGCGCTG GGCGTGTCGC TGGTGATCCA TCCGCACAGC
CCGCATGTGC CGACGTCTCA CGCCAACGTG CGGTTTTTCA TCGCTGAAAA AGAAGGCGAA
GAGCCGGTGT GGTGGTTCGG CGGTGGTTTC GACCTGACGC CTTACTATGG CGTTGAAGAA
GACTGCGTGC ACTGGCACCG GGTCGCGGAG CGGGCCTGCG CGCCCTTCGG CGATGATGTT
TACCCGCGTT ACAAGGCGTG GTGCGACAGC TATTTCCACC TCAAGCACCG CGACGAGCCG
CGCGGCATCG GCGGTCTGTT TTTCGATGAC GTGAACCAGT GGGATTTCGA CACCAGCTTC
GCATTCATTC GCGCCATCGG CGATGCATTC ATCAATGCCT ACCTGCCGAT CGTGCGCCGT
CGCAAGGCTG CGGCCTATAC CGTGCAGCAG CGCGAGTTTC AGGAATTCCG CCGTGGACGC
TACGTCGAGT TCAACCTGGT GTACGACCGC GGCACGCTGT TTGGTCTGCA ATCGGGTGGT
CGTACCGAGT CGATCCTCAT GTCGCTGCCG CCGCAAGTAC GCTGGGGCTA TGACTGGAAA
GCCGCGCCGG GCAGCGAAGA GGCGCGTCTG ACTGATTACT TCCTGACTGA TCGCGACTGG
CTGGCGGATA ACTGA
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| Protein sequence | MSTRTEAVKA YLLDLQDRIC TALEQEDGNA HFVEDAWTRP AGGGGRTRVV ENGAVIEKGG
VNFSHVFGSN LPPSASAHRP ELAGRGFEAL GVSLVIHPHS PHVPTSHANV RFFIAEKEGE
EPVWWFGGGF DLTPYYGVEE DCVHWHRVAE RACAPFGDDV YPRYKAWCDS YFHLKHRDEP
RGIGGLFFDD VNQWDFDTSF AFIRAIGDAF INAYLPIVRR RKAAAYTVQQ REFQEFRRGR
YVEFNLVYDR GTLFGLQSGG RTESILMSLP PQVRWGYDWK AAPGSEEARL TDYFLTDRDW
LADN
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