| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0159 |
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| Symbol | trpA |
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| ID | 1181767 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 180074 |
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| End bp | 180886 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637391536 |
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| Product | tryptophan synthase, alpha subunit |
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| Protein accession | NP_790018 |
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| Protein GI | 28867399 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0159] Tryptophan synthase alpha chain |
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| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCGTC TCGAACAACG TTTCGCCCAG CTGAAAACCG AAGGTCGCGC GGTACTGGTC
ACCTTCATCA CCGCTGGCGA CCCTGGCTAC GACACCTCGC TGAAAGTGCT CAAAGGCCTG
CCCGCTGCAG GTGCTGACGT GATCGAGCTG GGCATGCCGT TTACCGATCC GATGGCTGAT
GGTGTGGCCA TTCAGCTGGC CACGTTGCGC GCCCTGGACG CCGGCCAGAC GTTGCTGAAA
ACCTTGCAGA TGGTCAGCGA GTTTCGTGTC GACGATCAGA CCACGCCGAT TGTGCTGATG
GGTTATTACA ACCCGATCCA CCGTTTTGGC GTCGAAGCGT TCGTGGCACA GGCCAAGGAA
GCGGGCGTCG ATGGCTTGAT CATCGTTGAC CTGCCGCCCG AGCATGACGC CGAACTGGCG
ACGCCTGCAC AGGCGTCCGG CATCGACTTC ATCCGCCTGA CCACGCCGAC TACCGACGAT
GCGCGTCTGC CGCGCGTACT GGAGCGCAGT TCCGGTTTCG TCTACTACGT GTCGGTCGCC
GGTGTGACCG GTGCGGGTTC AGCGACCACC GAGCACGTCA CCGAAGCCAT CGCACGCCTG
CGTCGCCACA CCAGCCTGCC GATCAGCGTC GGTTTCGGTA TCCGCACACC TGAGCAGGCA
GCGGCCATTG CGCGTCTGGC TGACGGTGTT GTGGTGGGCT CGGCGTTCGT CGACAAGATC
GCCACAGCCG AGTCGCCGGA GCAGGCAATC GATGGCGTGT TGACGCTGTG CGCCGCACTG
GCCGAAGGCG TACGTAACGC CCGCGTCAGT TGA
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| Protein sequence | MSRLEQRFAQ LKTEGRAVLV TFITAGDPGY DTSLKVLKGL PAAGADVIEL GMPFTDPMAD
GVAIQLATLR ALDAGQTLLK TLQMVSEFRV DDQTTPIVLM GYYNPIHRFG VEAFVAQAKE
AGVDGLIIVD LPPEHDAELA TPAQASGIDF IRLTTPTTDD ARLPRVLERS SGFVYYVSVA
GVTGAGSATT EHVTEAIARL RRHTSLPISV GFGIRTPEQA AAIARLADGV VVGSAFVDKI
ATAESPEQAI DGVLTLCAAL AEGVRNARVS
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