| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0158 |
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| Symbol | trpB |
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| ID | 1181766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 178848 |
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| End bp | 180077 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637391535 |
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| Product | tryptophan synthase, beta subunit |
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| Protein accession | NP_790017 |
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| Protein GI | 28867398 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0133] Tryptophan synthase beta chain |
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| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.994719 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCAGA CCAACTTTCG CAGCGGCCCC GACGCCAACG GCCTGTTCGG CTCATTCGGC
GGTCGCTACG TAGCTGAAAC CCTGATGCCG CTGGTGCTGG ACCTCAACCG CGAGTACGAA
GCCGCCAAGG CCGATCCTGA GTTCATCAAG GAAATGGCCT ACTTCCAGCG CGATTACATT
GGCCGTCCCA ATCCGCTGTA CTTCGCCGAG CGCCTGACCG AATTCTGTGG CGGCGCGAAA
ATCTACTTCA AGCGTGAAGA GCTCAACCAC ACCGGCGCGC ACAAGATCAA CAACTGCATC
GGCCAGGTGC TGCTGGCCAA GCGCATGGGC AAAAAACGCC TGATCGCTGA AACCGGTGCA
GGCATGCACG GCGTTGCCAC TGCAACCGTT GCCGCGCGTT TCGGCCTGCC TTGCGTAATC
TACATGGGCG CGACCGACAT CGAGCGTCAA CAGGCCAACG TGTTCCGCAT GAAGCTGCTG
GGCGCTGAAA TCGTGCCGGT CACTTCCGGC ACCGGCACCC TGAAAGACGC GATGAACGAA
GCCCTGCGCG ACTGGGTAAC CAACGTCGAT GACACGTTCT ACCTGATCGG CACGGTGGCA
GGCCCGCACC CGTATCCGGC GATGGTGCGC GACTTCCAGT CCGTCATCGG CAAGGAAACC
AAAGAGCAAA TGCAGGAGAA GGAAGGCCGT CTGCCGGACA GCCTGATCGC CTGCGTCGGT
GGTGGCTCCA ACGCGATGGG GCTGTTCCAT CCGTTCCTTG ATGACGCCAG CGTAGAAATC
ATCGGCGTCG AAGCGGGCGG TCATGGCGTG GACACCGACA AGCATGCAGC CAGCCTGAAT
GGCGGCGTAC CGGGCGTGCT GCACGGCAAC CGCACCTACC TGTTGCAAGA TAACGACGGG
CAAATCACCG ACGCTCATTC GATTTCTGCT GGCCTGGACT ACCCTGGCAT CGGCCCGGAA
CACGCTTACC TGCACGAAGT GAAGCGCGTC GAATACGTCA GCATCACCGA CGAAGAAGCG
CTCGACGCGT TTCATCAGTG CTGCTTGCTC GAAGGCATTA TCCCGGCGCT GGAAACCGCT
CACGCACTGG CCGAAGCCAT GAAGCGCGCG ACCAACCTGC GCGACGATCA TTTGATGGTC
GTGTGCCTGT CCGGGCGCGG CGACAAAGAC ATGCAAACCG TCATGAACCA CATGGCAGCC
GCCGACAACA CTCAGGAGAA GCTGGTATGA
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| Protein sequence | MTQTNFRSGP DANGLFGSFG GRYVAETLMP LVLDLNREYE AAKADPEFIK EMAYFQRDYI
GRPNPLYFAE RLTEFCGGAK IYFKREELNH TGAHKINNCI GQVLLAKRMG KKRLIAETGA
GMHGVATATV AARFGLPCVI YMGATDIERQ QANVFRMKLL GAEIVPVTSG TGTLKDAMNE
ALRDWVTNVD DTFYLIGTVA GPHPYPAMVR DFQSVIGKET KEQMQEKEGR LPDSLIACVG
GGSNAMGLFH PFLDDASVEI IGVEAGGHGV DTDKHAASLN GGVPGVLHGN RTYLLQDNDG
QITDAHSISA GLDYPGIGPE HAYLHEVKRV EYVSITDEEA LDAFHQCCLL EGIIPALETA
HALAEAMKRA TNLRDDHLMV VCLSGRGDKD MQTVMNHMAA ADNTQEKLV
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