| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0144 |
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| Symbol | prlC |
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| ID | 1181752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 166673 |
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| End bp | 168724 |
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| Gene Length | 2052 bp |
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| Protein Length | 683 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637391521 |
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| Product | oligopeptidase A |
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| Protein accession | NP_790003 |
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| Protein GI | 28867384 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0339] Zn-dependent oligopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCGCGA ACAACCCTCT TCTGCAATCG TACGACCTGC CACCCTTTTC GGCGATTCGT
GCCGAACATG TCAAACCTGC TATCGAACAA ATCCTGGCCG ACAACCGTGC CGCGATTGTC
GACATCCTCA GCAAACAGGG CTCGACGCCG ACCTGGGCCG GGCTGGTGTT GACCATGGAC
GAGCTGAACG ACCGCTTGGG CGCTGCCTGG AGCCCGGTCA GCCATCTGAA TGCCGTGTGC
AACAGCCCTG AACTGCGTGA AGCGTATGAG TCGTGCCTGC CGGCATTGAG CGCCTACTCC
ACCGAGATGG GCCAGAATCG CGCACTGTTT CAGGCTTATG AAGCGCTGGC CAACAGCCCT
GAGGCCGCAG GCTTTGACGT CGGTCAGAAG ACCATTCTGG AGCAATCGCT GCGCGACTTC
CGCCTGTCCG GCATCGACCT GCCGCCCGAG CAGCAGAAAC GTTATGCGCA AGTGCAGAGC
AAATTGTCCG AGCTGGGCAG CCAGTTTTCC AACCAGTTGC TCGATGCCAC TCAGGCCTGG
ACCAAGCTGG TCGCTGACGA GTCCGCCCTC GCCGGCCTGA CCGATTCTGC CAAGCAACAG
ATGGCCGCAG CTGCCAAGGC CAAGGACCTC GAAGGCTACT TGATTACCCT GGAATTCCCG
AGCTACTACG CGGTAATGAC CTACGCCGAA GACCGTGCCC TGCGCGAAGA AGTCTACGCA
GCTTACTGTA CCCGTGCTTC GGACCAGGGT CCCAACGCTG GCAAGAACGA CAATACGCCG
GTGATGGAGC AGATTCTCGA TCTGCGCCAG GAGCTGGCGC AGTTGCTCGG CTACGCGAAC
TTTGCCGAGC TGAGCCTGGC GACCAAGATG GCAGAGTCCA GTGATCAGGT GTTGAGTTTC
CTGCGTGATC TGGCCAAACG CAGCAAGCCG TTCGCTGCTC AGGACCTGGA GCAGCTCAAG
ACTTATGCGG CCGAACAGGG TTGCCCGGAC CTGCAAAGCT GGGACAGCGG TTTTTACGGC
GAGAAGCTGC GCGAACAGCG TTACAGCGTT TCCCAGGAAA TCCTGCGCGC CTACTTCCCC
ATCGATAAGG TGCTCGGCGG CCTGTTTGCC ATCGTCCAGC GTCTGTACGG CATCGAGATT
GCCGAGCAGA AAGGCTTCGA CACCTGGCAC CCGGACGTTC GTCTGTTCGA GATCAAGGAA
AACGGCCAGC ACGTCGGGCG TTTCTTCTTT GATTTGTATG CTCGCGCCAA CAAGCGTGGC
GGTGCCTGGA TGGATGGCGC CCGTGATCGT CGTCGCACTG CGCAAGGTGC GCTGCAAAGC
CCGGTGGCTA ATCTGGTATG CAACTTCACG CCGGCCGCTG CCGGTAAGCC TGCGCTGCTG
ACCCACGATG AAGTCACCAC CCTGTTCCAC GAATTCGGTC ACGGCTTGCA CCACCTGCTG
ACCCGCGTCG AGCATGCGGG TGTTTCCGGT ATCAATGGCG TGGCATGGGA TGCGGTCGAG
TTGCCGAGCC AGTTCATGGA AAACTGGTGC TGGGAGCCTG AAGGTCTGGC GCTGATCTCC
GGTCATTACG AAACCGGCGA GCCACTGCCG CAGGACCTGC TGGAGAAAAT GCTCGCCGCC
AAGAACTTCC AGTCCGGTCT GATGATGGTG CGTCAGCTGG AGTTCTCGCT GTTCGACTTT
GAATTGCACG CCACCCACGG TGACGGGCGC AGCGTGCTTG ATGTGCTGGA AGGCATTCGT
GACGAAGTGT CGGTCATGCG TCCGCCTGCC TATAACCGTT TCCCGAACAG CTTTGCGCAC
ATCTTTGCAG GCGGTTACGC AGCCGGTTAC TACAGCTACA AGTGGGCCGA AGTACTGTCT
GCCGATGCGT TCTCCAAGTT CGAGGAAGAC GGCGTGCTTA ACGCCGAAAC CGGTCGGGCG
TTTCGCGAAG CCATTCTGGC GCGTGGCGGC TCACAGGTGC CGATGGTGCT GTTCGTCGAC
TTCCGCGGAC GTGAGCCGTC GATTGACGCA TTGTTGCGTC ACAGTGGCTT GAGTGAGGAC
GCGGCAGCAT GA
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| Protein sequence | MSANNPLLQS YDLPPFSAIR AEHVKPAIEQ ILADNRAAIV DILSKQGSTP TWAGLVLTMD
ELNDRLGAAW SPVSHLNAVC NSPELREAYE SCLPALSAYS TEMGQNRALF QAYEALANSP
EAAGFDVGQK TILEQSLRDF RLSGIDLPPE QQKRYAQVQS KLSELGSQFS NQLLDATQAW
TKLVADESAL AGLTDSAKQQ MAAAAKAKDL EGYLITLEFP SYYAVMTYAE DRALREEVYA
AYCTRASDQG PNAGKNDNTP VMEQILDLRQ ELAQLLGYAN FAELSLATKM AESSDQVLSF
LRDLAKRSKP FAAQDLEQLK TYAAEQGCPD LQSWDSGFYG EKLREQRYSV SQEILRAYFP
IDKVLGGLFA IVQRLYGIEI AEQKGFDTWH PDVRLFEIKE NGQHVGRFFF DLYARANKRG
GAWMDGARDR RRTAQGALQS PVANLVCNFT PAAAGKPALL THDEVTTLFH EFGHGLHHLL
TRVEHAGVSG INGVAWDAVE LPSQFMENWC WEPEGLALIS GHYETGEPLP QDLLEKMLAA
KNFQSGLMMV RQLEFSLFDF ELHATHGDGR SVLDVLEGIR DEVSVMRPPA YNRFPNSFAH
IFAGGYAAGY YSYKWAEVLS ADAFSKFEED GVLNAETGRA FREAILARGG SQVPMVLFVD
FRGREPSIDA LLRHSGLSED AAA
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