| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0141 |
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| Symbol | |
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| ID | 1181749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 163941 |
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| End bp | 165839 |
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| Gene Length | 1899 bp |
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| Protein Length | 632 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637391518 |
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| Product | lead uptake protein, putative |
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| Protein accession | NP_790000 |
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| Protein GI | 28867381 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0672] High-affinity Fe2+/Pb2+ permease |
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| TIGRFAM ID | [TIGR00145] FTR1 family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCTCC GTTCTCGTTT CCTTGTCTGG CTGCTGGTGC CACTACTGAC GCTGTGCAGT
AGCATCGCGC TGGCCGACCC TGTCGAGGGC GCAGCCCAGG CGTTGCACCT GCTGGATTAT
CTGGGTGCTG ACTACCCGGC CAGCGTGGCG GATGGCAAGG TTGTCGAAGC TGCCGACTAC
CAGCAGCAGA TTGAAGCCCT GACCACGCTA CAAGGCCTTG TGCTCGCTCT GCCGCAACGC
GCCGAGCGCG CGGATCTGGA ACAGGCTGTT GCGCAGCTGA AAAATGCCGT GAGCAGCAAA
CAGGACGGCA CACAGGTTGC GCGTCAGGCA CGGCAACTGG CGGCAAAACT GGCTGTGGCC
TATGAGGTCA GCCAGGCACC CGCCATCACG CCAGACCCAG CCCGTGGCGC GCCTCTGTAT
GCTCAGCATT GCTCGGTCTG TCATGGCGAC ACCGGTGCAG GTGACGGCCC GGCAGGTATC
GGTCTGGAGC CGCCGCCGTC GAACCTGCGT GACACTGCGC GGCTGGATCG CCTGAGTCTT
TACGATCTCT ACAACGCCCT CGGCCTTGGC ATTGCCGGCA CCGATATGCC CGCGTTCGCC
GACCAGCTGG ATGATCGCCA GCGCTGGGAC ATCGCGACCT CTATCGCAAG CTTCAGCGCG
CAACCTGTGG CCACTGCCAC CAAGGCGTTC AACCTGGCAG ACCTGGCCCG TCAAACCCCC
GCCGAGGTAC AGGCTGCGGA AGGCCCGGAC GCCGCAGCGA CCTTCCGCGC CCAGCGCGCA
CAACCGCCGC AGGTGCAGCG CGGCCCGGCG CAACTGCTCG ATTACACCGG TGTAACGCTG
GACAAGAGCC TGGCGGCCTA CAAGGCGGGT GATCGCGAGC AGGCCTACGA TTTGTCGGTG
GCGGCGTATC TGGAAGGTTT TGAGCTGGTC GAAAGCTCGC TGGATAACGT CGATGCCAAC
GTCCGTAAAG ACACCGAAAA GAGCCTGATG GCTTACCGTC AATCATTGCA GGACAGCCTG
CCGCTACCAC AGGTCGAGCA AAAGCTTGAG GTGGCCAAAG CCAAACTCAA AGAGTCGGCA
GGCCTGCTGG GCAGCGATGG TCTGAGCCTT TCGCTGAGCT ACATCTCAGG CCTGTTGATC
CTGCTGCGCG AAGGGCTGGA AGCGATTCTG GTGCTGGCGG CGATTCTGGC GTTCCTGCGT
AACACCGGCC AACAGTCCGC CGTGCGCAGC GTCAACGTGG GCTGGGGCCT GGCGCTGCTG
GCCGGTCTCG GGACCTGGGC ACTGGCGGCT TATGTCATTG ACGTCAGCGG CGCACAGCGT
GAGTTGCTGG AAGGGGCCAC CGCGTTGTTT GCCAGCGTGA TGGTGCTCTG GCTAGGCGTG
TGGATGCACG ACCGTCGCCA TGCAGCTGCC TGGCAGGACT ATGTCAAAAG CAGCCTGGTC
GGCGGCGGTG GCCGTTTCGG ATTCGCGGTG CTGGCGTTCT TCTCGGTGTA TCGCGAGCTG
TTCGAAGTCA TTTTGTTCTA CGAAACCCTG TGGCTGCAGG CAGGACCAGC CGGGCACAAC
GCAGTGCTGG CGGGCGGCGC CACGGCACTT GTGCTGCTGG TCGGTCTGGC GTGGGTGATT
CTGCGCGGCT CGGCGAAACT GCCGCTGTCG CTGTTCTTTG GCATCAACGC TGCACTGCTG
TGTGCGCTGT CGGTGGTGTT CGCCGGGCAT GGCGTCAAGG CCCTGCAAGA AGCTGGCATC
TTCGGTACCC GGCCAGTGCC GTTCTTCGAG TTCGACTGGC TGGGCATTCA CGCCGACCTG
TACTCGCTCG GTGCACAGGC CATCGCCCTT ACTGCCATTG CCGTGCTTTA CGGGCGTAGC
GTGCTGGCAG AGAAACGCAG GCTGCAGGCA TCAGCCTGA
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| Protein sequence | MPLRSRFLVW LLVPLLTLCS SIALADPVEG AAQALHLLDY LGADYPASVA DGKVVEAADY
QQQIEALTTL QGLVLALPQR AERADLEQAV AQLKNAVSSK QDGTQVARQA RQLAAKLAVA
YEVSQAPAIT PDPARGAPLY AQHCSVCHGD TGAGDGPAGI GLEPPPSNLR DTARLDRLSL
YDLYNALGLG IAGTDMPAFA DQLDDRQRWD IATSIASFSA QPVATATKAF NLADLARQTP
AEVQAAEGPD AAATFRAQRA QPPQVQRGPA QLLDYTGVTL DKSLAAYKAG DREQAYDLSV
AAYLEGFELV ESSLDNVDAN VRKDTEKSLM AYRQSLQDSL PLPQVEQKLE VAKAKLKESA
GLLGSDGLSL SLSYISGLLI LLREGLEAIL VLAAILAFLR NTGQQSAVRS VNVGWGLALL
AGLGTWALAA YVIDVSGAQR ELLEGATALF ASVMVLWLGV WMHDRRHAAA WQDYVKSSLV
GGGGRFGFAV LAFFSVYREL FEVILFYETL WLQAGPAGHN AVLAGGATAL VLLVGLAWVI
LRGSAKLPLS LFFGINAALL CALSVVFAGH GVKALQEAGI FGTRPVPFFE FDWLGIHADL
YSLGAQAIAL TAIAVLYGRS VLAEKRRLQA SA
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