| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0129 |
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| Symbol | hemD |
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| ID | 1181737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 153498 |
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| End bp | 154274 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637391506 |
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| Product | uroporphyrinogen-III synthetase |
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| Protein accession | NP_789988 |
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| Protein GI | 28867369 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1587] Uroporphyrinogen-III synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGCCT GGCGTCTGCT GCTGACCCGT CCCGCCGAAG AATCGGCGGC GCTGGCAAGG
GTGCTGGCAG ATGCCGGAAT CTTCAGCAGC AGTCTGCCTT TACTTGAAAC CGAGCCTTTA
CCCTTGACGC CTGCACAGCG TTCGATCATT TTCGAGCTGC TCAATTACAG TGCAGTCATC
GTGGTCAGCA AACCTGCTGC GCGGCTGGCC ATCGAACTGA TCGATGAAGT GTGGCCGCAA
CCGCCTATGC AGCCGTGGTT CAGTGTGGGT TCAGCAACCG GGCAGATACT CCTTGATTAC
GGACTCGATG CGAGCTGGCC GGAGCAGGGC GATGACAGCG AGGCCTTGCT CGACCATCCA
CGCCTTAAAC AGGCGATTGC CGTACCTGGA AGTCGCGTAC TGATCATGCG CGGCAATGAG
GGACGTGAAC TGCTGGCCGA GCAATTACGC GAACGGGGGG TGGGTGTCGA TTACCTGCCG
CTGTACCGTC GCTACCTGCC GCAGCACGCC CCCGGCACCC TGTTGCAACG CGTAGAGGTG
GAACGCTTGA ACGGGCTGGT GGTCAGCAGT GGGCAGGGTT TTGAACATTT GCTTCAGTTG
GCAGGTGATT CATGGCCGGA TCTGGCCGGT CTGCCGCTGT TTGTACCGAG CCCCCGGGTT
GCCAGCCTTG CGCAGGCAGC GGGCGCCCGG AACGTTATTG ATTGTCGTGG CGCCAGCGCA
GCGGCATTGC TGGCAGCGTT GCGGGATCAA CCCCAGCCTG CCGTCAAAGC GTATTGA
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| Protein sequence | MSAWRLLLTR PAEESAALAR VLADAGIFSS SLPLLETEPL PLTPAQRSII FELLNYSAVI
VVSKPAARLA IELIDEVWPQ PPMQPWFSVG SATGQILLDY GLDASWPEQG DDSEALLDHP
RLKQAIAVPG SRVLIMRGNE GRELLAEQLR ERGVGVDYLP LYRRYLPQHA PGTLLQRVEV
ERLNGLVVSS GQGFEHLLQL AGDSWPDLAG LPLFVPSPRV ASLAQAAGAR NVIDCRGASA
AALLAALRDQ PQPAVKAY
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