| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0128 |
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| Symbol | hemC |
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| ID | 1181736 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 152560 |
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| End bp | 153501 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637391505 |
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| Product | porphobilinogen deaminase |
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| Protein accession | NP_789987 |
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| Protein GI | 28867368 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCTCTC GCGAAATCCG CATTGCCACG CGCAAAAGTG CGCTGGCGCT CTGGCAGGCC
GAATACGTAA AAGCTCGCCT CGAACAGGCT CACCCCGGCC TGCTCGTTAC CCTGGTGCCC
ATGGTCAGCC GTGGCGACAA GCTGCTCGAC TCCCCGCTGT CGAAAATCGG CGGCAAAGGC
CTGTTCGTCA AAGAGCTGGA AACGGCGTTG CTGGAAGACA ACGCCGACAT CGCCGTGCAC
TCGATGAAAG ACGTGCCGAT GGACTTCCCC CAGGGGCTGG GTCTGTTCTG CATCTGCGAG
CGTGAAGACC CGCGCGATGC GTTCGTGTCC AATACCTTTG AGAGCCTGGA CGCACTGCCG
GCGGGAAGCA TCGTCGGCAC CTCCAGCCTG CGCCGCCAGG CCCAACTGCT GGCGCGACGT
CCTGACCTGC AGATCCGTTT CCTGCGTGGC AACGTCAATA CCCGTTTGGC CAAGCTGGAC
GCCGGCGAAT ACAACGCCAT TATTCTTGCC GCTGCCGGCT TGATCCGCCT GGGCTTCGAA
GACCGCATCA CCTCGGCGAT CAGCGTCGAT GACAGCCTGC CAGCGGGTGG CCAGGGGGCT
GTGGGTATCG AGTGCCGCAG CGTCGATGCC GAAATTCATG CCCTGCTGGC CCCGCTGCAC
CATGAAGACA CCGCTGTGCG GGTGATTGCC GAACGTTCGC TGAACAAGCA CCTCAATGGT
GGCTGTCAGG TGCCTATCGC CTGTTACGCA GTGCTGGAAG GCGATGATGT CTGGCTGCGC
GGGCTGGTCG GCGATCCGTC AGGGCGGGTG TTGCTGCACG CCGACGCCCG AGCGCCGCAG
ACCTCTGCAC AGGCGCTGGG CGTGCAGGTT GCCGAAGCAT TGCTGGCTCA AGGGGCTGCC
GAGATCCTCA AGGCCGTCTA CGGCGAGGCC AACAACGAAT GA
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| Protein sequence | MSSREIRIAT RKSALALWQA EYVKARLEQA HPGLLVTLVP MVSRGDKLLD SPLSKIGGKG
LFVKELETAL LEDNADIAVH SMKDVPMDFP QGLGLFCICE REDPRDAFVS NTFESLDALP
AGSIVGTSSL RRQAQLLARR PDLQIRFLRG NVNTRLAKLD AGEYNAIILA AAGLIRLGFE
DRITSAISVD DSLPAGGQGA VGIECRSVDA EIHALLAPLH HEDTAVRVIA ERSLNKHLNG
GCQVPIACYA VLEGDDVWLR GLVGDPSGRV LLHADARAPQ TSAQALGVQV AEALLAQGAA
EILKAVYGEA NNE
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