| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0125 |
|---|
| Symbol | argH |
|---|
| ID | 1181733 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | - |
|---|
| Start bp | 148983 |
|---|
| End bp | 150377 |
|---|
| Gene Length | 1395 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637391502 |
|---|
| Product | argininosuccinate lyase |
|---|
| Protein accession | NP_789984 |
|---|
| Protein GI | 28867365 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0165] Argininosuccinate lyase |
|---|
| TIGRFAM ID | [TIGR00838] argininosuccinate lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCG ACAAGACCAA CCAGTCCTGG GGCGGCCGCT TCAGTGAACC CGTCGACGCG
TTTGTCGCGC GTTTCACTGC CTCCGTCACC TTCGATCAAC GCCTGTATCG CCACGACATC
ATGGGCTCCA TCGCCCACGC CACCATGCTG GCCAAGGTGG GCGTCCTGAC CGACGCCGAG
CGCGATACCA TCGTGGACGG CCTGAACACC ATTCAGGCCG AGATCGAGGC CGGCAACTTC
GAATGGCGCG TCGATCTCGA AGACGTGCAC ATGAACATCG AGGCCCGCCT GACCGATCGT
ATCGGTATCA CCGGCAAGAA GCTGCACACC GGTCGCAGCC GTAACGATCA GGTCGCCACC
GATATCCGCC TGTGGCTGCG TGACGAAATC GACCTGATCC TCAGTGAGAT CACCCGCCTG
CAAAAGGGCC TGCTGGTTCA GGCCGAGCGC GAATCCGATA CCATCATGCC CGGCTTCACG
CACCTGCAGA CCGCACAGCC GGTCACATTT GGTCACCATA TGCTGGCCTG GTTTGAAATG
CTCAGCCGTG ACTACGAGCG TCTGGTGGAC TGCCGCAAAC GCTTGAACCG CATGCCTTTG
GGCAGCGCTG CGCTGGCAGG CACCACCTAC CCGATCGACC GCGAGCTGAC CTGCAAACTG
CTGGGTTTCG ACGTGGTGGG CGGCAACTCG CTGGACGGCG TTTCGGACCG TGACTTCGCC
ATTGAATTCT GCTCGGCTGC GTCCATCGCG ATGATGCACT TGTCGCGCTT TTCCGAAGAA
CTGGTGCTCT GGACCAGTGC GCAGTTCCAG TTCATCGATC TGCCGGATCG CTTCTGTACC
GGCAGCTCGA TCATGCCGCA GAAGAAAAAC CCTGACGTGC CTGAGCTGGT GCGTGGCAAG
AGTGGCCGCG TATTCGGCGC GCTGATGGGC CTGCTGACCC TGATGAAAGG CCAGCCGCTG
GCTTACAACA AGGACAATCA GGAAGACAAG GAGCCCCTGT TCGACGCTGC CGACACCCTG
CGTGATTCGC TGCGTGCGTT TGCCGACATG ATCCCGGCAA TCAAACCCAG GCACGCCATC
ATGCGCGAAG CGGCGCTGCG CGGGTTCTCG ACCGCTACCG ATCTGGCTGA CTATCTGGTT
CGCCGTGGCC TGCCGTTCCG TGACTGCCAC GAAATTGTTG GCCATGCCGT GAAATATGGC
GTCGAGACCG GCAAGGACCT GGCTGAAATG AGCCTGGAAG AGTTGCGTCA ATTCAGTAAC
CAGATCGAGC AGGACGTGTT CGCCGTGCTG ACCCTGGAAG GCTCGGTCAA CGCCCGTAAC
CATGTCGGCG GCACCGCACC TGAACAAGTC CGCGCCGCCG TGGCTCGTGG CCAGGAGCTG
CTGGCCGGGC GTTGA
|
|---|
| Protein sequence | MSTDKTNQSW GGRFSEPVDA FVARFTASVT FDQRLYRHDI MGSIAHATML AKVGVLTDAE
RDTIVDGLNT IQAEIEAGNF EWRVDLEDVH MNIEARLTDR IGITGKKLHT GRSRNDQVAT
DIRLWLRDEI DLILSEITRL QKGLLVQAER ESDTIMPGFT HLQTAQPVTF GHHMLAWFEM
LSRDYERLVD CRKRLNRMPL GSAALAGTTY PIDRELTCKL LGFDVVGGNS LDGVSDRDFA
IEFCSAASIA MMHLSRFSEE LVLWTSAQFQ FIDLPDRFCT GSSIMPQKKN PDVPELVRGK
SGRVFGALMG LLTLMKGQPL AYNKDNQEDK EPLFDAADTL RDSLRAFADM IPAIKPRHAI
MREAALRGFS TATDLADYLV RRGLPFRDCH EIVGHAVKYG VETGKDLAEM SLEELRQFSN
QIEQDVFAVL TLEGSVNARN HVGGTAPEQV RAAVARGQEL LAGR
|
|---|
| |