Gene PSPTO_0105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0105 
Symbol 
ID1181713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp123831 
End bp124430 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content57% 
IMG OID637391482 
ProductDNA-binding protein 
Protein accessionNP_789964 
Protein GI28867345 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG0662] Mannose-6-phosphate isomerase
[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGGCGT TCATCTCGAC TAGACCTGAC AAAAACTGGG GGAATATCGC ATTGGACGTG 
GGTGAACGGC TGCAATCGAT TCGCAAGCTC AAGGGCCTGT CCCAGCGTGA ACTCGCCAAA
CGGGCAGGCG TGACCAATAG CACCATCTCC ATGATCGAGA AAAACAGCGT CAGCCCGTCG
ATCAGTTCCC TGCGCAAAGT GCTGGGTGGC ATTCCCATGT CCATGGTCGA GTTTTTTTCC
GAAGAGACCG TGCCGGAAAA CTCAGCTCAG GTGGTCTACA AGGCCAGCGA GCTGATCGAT
ATCTCTGACG GCGCCGTGAC CATGAAGCTG GTCGGCAAAT CGCATCAGGG CCGCGCCATC
GCGTTTCTCA CCGAAACCTA CCCGCCGGGT GCAGACACCG GGGAAGAAAT GCTGATTCAT
GAGGGCGAAG AAACCGGAAT CCTTGTGGAA GGGCGTCTTG AGCTGGTGGT CGGGCTCGAC
ACCTACTTGC TAGAAGCGGG CGACAGCTAC TATTTCGCAA GCACCCGACC GCATCGCTTC
CGCAACCCGT TCGACGTGCC TGCGCGGTTG ATCAGCGCGG CAACACCCGC CAATTTCTGA
 
Protein sequence
MMAFISTRPD KNWGNIALDV GERLQSIRKL KGLSQRELAK RAGVTNSTIS MIEKNSVSPS 
ISSLRKVLGG IPMSMVEFFS EETVPENSAQ VVYKASELID ISDGAVTMKL VGKSHQGRAI
AFLTETYPPG ADTGEEMLIH EGEETGILVE GRLELVVGLD TYLLEAGDSY YFASTRPHRF
RNPFDVPARL ISAATPANF