Gene PSPTO_0102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0102 
Symbol 
ID1181710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp122249 
End bp122602 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content59% 
IMG OID637391479 
Productendoribonuclease L-PSP family protein 
Protein accessionNP_789961 
Protein GI28867342 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAATCC AGCGCCAGCT CACCAATGAG CGCATGAGTC AGGTCGTCGT CCACAATGGC 
ACCGTTTATC TGGCGGGGCA GGTAGGCGAT GACATGACTG CGGGTGTCGA GCAGCAAACC
CGAGAGGTGC TGAACAGCAT CGAGCGTTTG CTCGACCTGG CCGGCACCGA CAAAACGCGC
ATTCTGTCGG TCACGATCTA CCTCAAAGAC ATCGACGCTG ACTTCGCGGG CATGAACAGC
GTCTGGGACA AATGGCTGCC CAAGGGCTTC GCACCTGCGC GTGCAACGGT CGAAGCCAAA
CTGTGCGAGC CGCAAATCCT CGTCGAACTG TCGGTTATTG CCGCGCTGCC GTAA
 
Protein sequence
MSIQRQLTNE RMSQVVVHNG TVYLAGQVGD DMTAGVEQQT REVLNSIERL LDLAGTDKTR 
ILSVTIYLKD IDADFAGMNS VWDKWLPKGF APARATVEAK LCEPQILVEL SVIAALP