| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0101 |
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| Symbol | dadA |
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| ID | 1181709 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 120976 |
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| End bp | 122277 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637391478 |
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| Product | D-amino acid dehydrogenase, small subunit |
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| Protein accession | NP_789960 |
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| Protein GI | 28867341 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGTTC TGGTCCTTGG TAGTGGCGTA ATCGGTACAA CCAGTGCTTA TTATCTGGCG
CGTGCCGGCT TCCAGGTGAC AGTGGTCGAT CGTCAGCCGG CGGTCGGCAT GGAAACCAGC
TTCGCCAATG CCGGTCAGGT CTCGCCGGGC TACGCCTCGC CTTGGGCTGC GCCGGGTGTG
CCGCTCAAGG CAATCAAATG GCTGCTGCAG CGTCATTCGC CTCTGGCAAT CAAAGCCACC
GCAGATATTG ATCAATACCT GTGGATGGCG CAAATGCTTC GCAATTGCAC GGCCAACCGC
TATGCCGTCA ACAAAGAGCG CATGGTGCGT CTGTCCGAAT ACAGCCGCGA TTGCCTTGAT
GAGCTGCGCA TCGAAACCGG CATTGCCTAT GAAGGGCGCA GCCTGGGGAC CACCCAGTTG
TTTCGGACCC AGGCACAACT GGATAACGCC GCCAAGGATA TCGCCGTGCT TGAACAGTCC
GGCGTGCCTT ACGAGCTGCT GGACCGCGCA GGCATTGCCC GTGTCGAGCC TGCGCTTGCC
GGTGTGACCG GCATCCTCAG TGGCGCACTG CGCCTGCCCA ACGACCAGAC CGGCGATTGC
CAGTTGTTCA CCACGCGCCT GGCTCAGATG GCTGTCGAGC TGGGTGTCGA GTTTCGTTAC
GGGCAGAACA TCGAACGCCT TGAGCATGCA GGCGACACCG TCAGTGGCGT GTGGATTGAT
GGTGTACTGG AAACCGCTGA CCGCTACGTG CTGGCGCTGG GCAGCTATTC GCCGCAGTTG
CTCAAGCCGC TGGGCATCAA GGCACCGGTC TACCCGCTCA AGGGCTATTC GCTGACCGTG
CCGATCAGCA ACCCGGCCAT GGCACCGACT TCAACCATTC TCGATGAAAC CTACAAAGTC
GCCATCACCC GCTTCGATAA CCGGATCCGG GTCGGCGGCA TGGCGGAAAT CGCCGGGTTC
GATCTCTCGC TCAACCCGCG TCGGCGTGAA ACGCTGGAGA TGATCGTCGG CGACCTCTAT
CCTCAGGGCG GCGACCTGAG CCAGGCCAGT TTCTGGACCG GGCTGCGTCC GACTACACCC
GATGGCACAC CGATCGTGGG TGCAACACCG TTGCGCAACC TGTTCCTCAA TACCGGTCAC
GGTACATTGG GCTGGACGAT GGCGTGCGGT TCAGGCCGCT TGCTGGCAGA CCTCATTGCC
CGCAAGAGAC CTCAGATCAG TGCCGCAGGG CTTGATATTT CTCGTTACGG CAACCCCCAG
GAGAATGCAC AGCATGTCAA TCCAGCGCCA GCTCACCAAT GA
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| Protein sequence | MRVLVLGSGV IGTTSAYYLA RAGFQVTVVD RQPAVGMETS FANAGQVSPG YASPWAAPGV
PLKAIKWLLQ RHSPLAIKAT ADIDQYLWMA QMLRNCTANR YAVNKERMVR LSEYSRDCLD
ELRIETGIAY EGRSLGTTQL FRTQAQLDNA AKDIAVLEQS GVPYELLDRA GIARVEPALA
GVTGILSGAL RLPNDQTGDC QLFTTRLAQM AVELGVEFRY GQNIERLEHA GDTVSGVWID
GVLETADRYV LALGSYSPQL LKPLGIKAPV YPLKGYSLTV PISNPAMAPT STILDETYKV
AITRFDNRIR VGGMAEIAGF DLSLNPRRRE TLEMIVGDLY PQGGDLSQAS FWTGLRPTTP
DGTPIVGATP LRNLFLNTGH GTLGWTMACG SGRLLADLIA RKRPQISAAG LDISRYGNPQ
ENAQHVNPAP AHQ
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