| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0096 |
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| Symbol | |
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| ID | 1181704 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 116690 |
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| End bp | 118111 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637391473 |
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| Product | transcriptional regulator, GntR family/aminotransferase, class I |
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| Protein accession | NP_789955 |
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| Protein GI | 28867336 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCTCT ACGTCAACCT TGCCGAACTG CTCGGCTCGC GCATCGAAAA CGGCTTTTAC
CGGCCCGGCG ACCGTCTGCC GTCGGTACGC GCCTTGAGCG TCGAACACGG TGTCAGTTTG
AGCACCGTGC AGCAGGCGTA CCGGGTTCTG GAAGACAGCG GGCTGGCCGC GCCGAAACCC
AAATCCGGCT ATTTTGTCTC GGTCAGCAGG CATGCACCCG CGCTCCCGGC GGTGGGTCGG
CCAGCGCAAC GGCCTGTGGA TATCTCTCAA TGGGATCAGG TGCTGGACCT GATTCGGGTA
GCGCCCCGCG AGGCGGTCAC CCAACTGGGG CGCGGCATGC CCGACGTCAC CAGCCCGACT
CTGAAACCGC TGATGCGCGC CTTGGGCCAG TTGAGCCGCC ATCAGGACAT GCCGGGCCTG
TATTATGACA ATATTTACGG CGTGCTCAGG CTGCGTGAGC AGGTTGCCCG GTTGATGCTC
GACTCCGGCT GCAACCTGAC CGCCAATGAC GTGATCATCA CCAATGGCTG TCATGAGGCA
CTGTCTGCAA GCGTGCGGGC GATCTGCTCG CCCGGTGACA TCGTGGCGGT GGACTCGCCA
AGCTTCTTCG GTGCCATGCA GACCCTCAAG GGTGTGGGCA TGAAGGCGCT GGAAATCCCC
ACCGATCCGT TGACTGGCAT CAGCCTTGAA GCGCTGGAAC TGGCCCTTGA GCAGTGGCCG
ATCAAGGTCA TCCAGCTGAC GCCCAACTGC AACAACCCGC TGGGTTACGT CATGCCGGAA
GCCCGAAAGC GCGCCTTGCT GACCCTGGCG CAACGCTTTG ACGTGGCGAT CATTGAGGAT
GATGTGTATG GCGATCTGGC CTACAACTAC CCTCGCCCGC GCACCATCAA GTCGTTCGAT
GAGGATGGCC GCGTGCTGCT CTGCAGTTCG TTTTCCAAAA CCCTGGCACC TGGGCTGCGG
ATTGGCTGGG TCGCGCCGGG CCGCTATCTG GAGCGGGTGC TGCACATGAA ATACATCGGC
ACCGGTTCCA CTGCCCCGCA GCCGCAACTG GCCATCGCCG ATTTTCTTGA AGGCGGGCAT
TACGAGCCGC ACGTGCGCCG CATGCGTACG CAGTATCAGC GCAGCCGTGA CCAGATGATC
GACTGGGTGA TGCGCTATTT CCCGGAAGGC ACCCGCGCCA GTCGTCCACA GGGCAGTTTC
ATGTTGTGGG TGGAGCTGGC CGAGGATTTT GACACGTTGC GCTTGAATCG CGCCTTGCTG
GACAAGGGTG TGCAGATTGC CGTGGGCAGT ATTTTTTCGG CCTCGGGCAA ATACCGCAAC
TGCATGCGCT TGAACTACGC AGCCAAATCG AGCCGCGAAA TCGAGAGCGC CGTGCGTATC
GTGGGCGAGA CGATTGCGCA ACTGATTGCG CAAAGTGACT GA
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| Protein sequence | MTLYVNLAEL LGSRIENGFY RPGDRLPSVR ALSVEHGVSL STVQQAYRVL EDSGLAAPKP
KSGYFVSVSR HAPALPAVGR PAQRPVDISQ WDQVLDLIRV APREAVTQLG RGMPDVTSPT
LKPLMRALGQ LSRHQDMPGL YYDNIYGVLR LREQVARLML DSGCNLTAND VIITNGCHEA
LSASVRAICS PGDIVAVDSP SFFGAMQTLK GVGMKALEIP TDPLTGISLE ALELALEQWP
IKVIQLTPNC NNPLGYVMPE ARKRALLTLA QRFDVAIIED DVYGDLAYNY PRPRTIKSFD
EDGRVLLCSS FSKTLAPGLR IGWVAPGRYL ERVLHMKYIG TGSTAPQPQL AIADFLEGGH
YEPHVRRMRT QYQRSRDQMI DWVMRYFPEG TRASRPQGSF MLWVELAEDF DTLRLNRALL
DKGVQIAVGS IFSASGKYRN CMRLNYAAKS SREIESAVRI VGETIAQLIA QSD
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