Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0084 |
Symbol | dut |
ID | 1181692 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 106375 |
End bp | 106830 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637391461 |
Product | deoxyuridine 5'triphosphate nucleotidohydrolase |
Protein accession | NP_789943 |
Protein GI | 28867324 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0756] dUTPase |
TIGRFAM ID | [TIGR00576] deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCACGCTC TACAAGCCAA GATCCTCGAC CCTCGCATTG GCAACGAATT TCCGCTCCCG GCTTACGCCA CCGTGGGTTC GGCCGGCCTG GACCTGCGCG CCATGCTCAA GGAAGACACC CTTCTCGAGC CCGGCCAGAC CCTGCTGATC CCCACCGGCC TGTCGATCTA CATCGGCGAT CCGGGGCTTG CCGCCCTGAT TCTGCCGCGC TCCGGCCTGG GTCATAAGCA TGGCATCGTG CTGGGCAATC TGGTTGGCCT GATCGACTCC GATTATCAGG GCGAGCTGAT GGTGTCTTGC TGGAACCGTG GTCAGACTGC ATTCACCATC GCAGTGGGCG AGCGTATTGC ACAACTGGTG CTGGTGCCTG TGGTACAGGC CCGTTTCGAG CTGGTAGAAG AATTCGACGA AAGTCAGCGT GGCACAGGCG GCTTCGGTCA CTCCGGCAGC CATTGA
|
Protein sequence | MHALQAKILD PRIGNEFPLP AYATVGSAGL DLRAMLKEDT LLEPGQTLLI PTGLSIYIGD PGLAALILPR SGLGHKHGIV LGNLVGLIDS DYQGELMVSC WNRGQTAFTI AVGERIAQLV LVPVVQARFE LVEEFDESQR GTGGFGHSGS H
|
| |