Gene PSPTO_0079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0079 
Symbol 
ID1181687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp100403 
End bp101182 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content57% 
IMG OID637391456 
Productexodeoxyribonuclease III, putative 
Protein accessionNP_789938 
Protein GI28867319 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGATCA TCAGTGTGAA CGTAAATGGC ATTCAGGGCG CAGTCGAGCG TGGTTTGCTC 
AGTTGGCTGC AAGCTCAGAA TGCCGACGTC ATCTGCTTAC AGGACACCCG CGCCTCCGCC
TTTGAACTGG ATGATCCAGC TTTTCAGCTG GATGGCTACT TTCTCTATGC CTGCGAAGCC
GAAGTTCCAG CCCAGGGCGG TGTGGCGCTT TATTCGCGGT TGCAGCCCAA GGCGGTCATC
AGTGGCCTGG GTTTCGAGAC AGCCGACCGC TACGGGCGTT ACCTGCAAGC AGATTTCGAC
AAGGTCAGTA TCGCCACCCT GCTCTTCCCT TCGGGAATGA ACGGGGATGA AGATCTGAAC
CAGAAATTCA AGCTCATGGA CGATTTCGGC AAGTACATGG ACAAGCAACG CCGCAAGCGT
CGCGAGTACA TCTACTGCGG GTCGCTCTAT GTGGCGCAGC AGAAGCTCGA CATCAAGAAC
TGGCGTGACA GTCAGCAATC TCCTGGTTTC CTGGCACCTG AACGCGCCTG GATGGACGAG
ATTGTCGGCA CAATGGGCTA TGTCGATGCC CTGCGTGAAG TCAGTCGTGA GGGTGATCAG
TACAGCTGGT GGCCAGATAA CGAACAGGCC GAGATGCTCA ATCTGGGCTG GCGTTTCGAT
TATCAGATCC TGACACCAGG CCTGCGCCGC TTTGTGCGTA GCGCCCGTCT GCCACGTCAG
CCGCGCTTTT CACAGCACGC GCCCTTGATC GTTGATTACG ACTGGACCCT GACTATCTGA
 
Protein sequence
MRIISVNVNG IQGAVERGLL SWLQAQNADV ICLQDTRASA FELDDPAFQL DGYFLYACEA 
EVPAQGGVAL YSRLQPKAVI SGLGFETADR YGRYLQADFD KVSIATLLFP SGMNGDEDLN
QKFKLMDDFG KYMDKQRRKR REYIYCGSLY VAQQKLDIKN WRDSQQSPGF LAPERAWMDE
IVGTMGYVDA LREVSREGDQ YSWWPDNEQA EMLNLGWRFD YQILTPGLRR FVRSARLPRQ
PRFSQHAPLI VDYDWTLTI