Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0079 |
Symbol | |
ID | 1181687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 100403 |
End bp | 101182 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637391456 |
Product | exodeoxyribonuclease III, putative |
Protein accession | NP_789938 |
Protein GI | 28867319 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0708] Exonuclease III |
TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III [TIGR00633] exodeoxyribonuclease III (xth) |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGATCA TCAGTGTGAA CGTAAATGGC ATTCAGGGCG CAGTCGAGCG TGGTTTGCTC AGTTGGCTGC AAGCTCAGAA TGCCGACGTC ATCTGCTTAC AGGACACCCG CGCCTCCGCC TTTGAACTGG ATGATCCAGC TTTTCAGCTG GATGGCTACT TTCTCTATGC CTGCGAAGCC GAAGTTCCAG CCCAGGGCGG TGTGGCGCTT TATTCGCGGT TGCAGCCCAA GGCGGTCATC AGTGGCCTGG GTTTCGAGAC AGCCGACCGC TACGGGCGTT ACCTGCAAGC AGATTTCGAC AAGGTCAGTA TCGCCACCCT GCTCTTCCCT TCGGGAATGA ACGGGGATGA AGATCTGAAC CAGAAATTCA AGCTCATGGA CGATTTCGGC AAGTACATGG ACAAGCAACG CCGCAAGCGT CGCGAGTACA TCTACTGCGG GTCGCTCTAT GTGGCGCAGC AGAAGCTCGA CATCAAGAAC TGGCGTGACA GTCAGCAATC TCCTGGTTTC CTGGCACCTG AACGCGCCTG GATGGACGAG ATTGTCGGCA CAATGGGCTA TGTCGATGCC CTGCGTGAAG TCAGTCGTGA GGGTGATCAG TACAGCTGGT GGCCAGATAA CGAACAGGCC GAGATGCTCA ATCTGGGCTG GCGTTTCGAT TATCAGATCC TGACACCAGG CCTGCGCCGC TTTGTGCGTA GCGCCCGTCT GCCACGTCAG CCGCGCTTTT CACAGCACGC GCCCTTGATC GTTGATTACG ACTGGACCCT GACTATCTGA
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Protein sequence | MRIISVNVNG IQGAVERGLL SWLQAQNADV ICLQDTRASA FELDDPAFQL DGYFLYACEA EVPAQGGVAL YSRLQPKAVI SGLGFETADR YGRYLQADFD KVSIATLLFP SGMNGDEDLN QKFKLMDDFG KYMDKQRRKR REYIYCGSLY VAQQKLDIKN WRDSQQSPGF LAPERAWMDE IVGTMGYVDA LREVSREGDQ YSWWPDNEQA EMLNLGWRFD YQILTPGLRR FVRSARLPRQ PRFSQHAPLI VDYDWTLTI
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