Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0078 |
Symbol | |
ID | 1181686 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 99962 |
End bp | 100333 |
Gene Length | 372 bp |
Protein Length | 123 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637391455 |
Product | hypothetical protein |
Protein accession | NP_789937 |
Protein GI | 28867318 |
COG category | [S] Function unknown |
COG ID | [COG3296] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAATG ACAGTCCGCA GCCCTTGTAC AAACCCAGCC GGGAAGCCCG CCAGTGGGCG ATGTTCTGTC ATTTATCTGC ACTCATCGGG CTGGTCTTTC CCTTTGGCAA TCTCCTTGCG CCATTGATTC TCTGGCAAAT GAAGAGGGAA TCAGACCCGT TCATCGACTC GCAAGGCAAG GAAGCGCTGA ACTTTCAAAT CACTGCCGCG ATTGCGGGCC TGATATGCAT AATGTTGATG TTCGTGGTAA TCGGCATCGC GCTGTTCATG CTGGTATGTC TTGGCGCTTT CATACTCACG GTTATCGCCG GAGTGAAGGC CAACAATGGA CTGGAATATC GTTATCCGTT TACCTGGCGC GTGCTGAAAT AA
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Protein sequence | MMNDSPQPLY KPSREARQWA MFCHLSALIG LVFPFGNLLA PLILWQMKRE SDPFIDSQGK EALNFQITAA IAGLICIMLM FVVIGIALFM LVCLGAFILT VIAGVKANNG LEYRYPFTWR VLK
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