Gene PSPTO_0078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0078 
Symbol 
ID1181686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp99962 
End bp100333 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content51% 
IMG OID637391455 
Producthypothetical protein 
Protein accessionNP_789937 
Protein GI28867318 
COG category[S] Function unknown 
COG ID[COG3296] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAATG ACAGTCCGCA GCCCTTGTAC AAACCCAGCC GGGAAGCCCG CCAGTGGGCG 
ATGTTCTGTC ATTTATCTGC ACTCATCGGG CTGGTCTTTC CCTTTGGCAA TCTCCTTGCG
CCATTGATTC TCTGGCAAAT GAAGAGGGAA TCAGACCCGT TCATCGACTC GCAAGGCAAG
GAAGCGCTGA ACTTTCAAAT CACTGCCGCG ATTGCGGGCC TGATATGCAT AATGTTGATG
TTCGTGGTAA TCGGCATCGC GCTGTTCATG CTGGTATGTC TTGGCGCTTT CATACTCACG
GTTATCGCCG GAGTGAAGGC CAACAATGGA CTGGAATATC GTTATCCGTT TACCTGGCGC
GTGCTGAAAT AA
 
Protein sequence
MMNDSPQPLY KPSREARQWA MFCHLSALIG LVFPFGNLLA PLILWQMKRE SDPFIDSQGK 
EALNFQITAA IAGLICIMLM FVVIGIALFM LVCLGAFILT VIAGVKANNG LEYRYPFTWR
VLK