Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0076 |
Symbol | |
ID | 1181684 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 98040 |
End bp | 98903 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637391453 |
Product | hypothetical protein |
Protein accession | NP_789935 |
Protein GI | 28867316 |
COG category | [S] Function unknown |
COG ID | [COG1561] Uncharacterized stress-induced protein |
TIGRFAM ID | [TIGR00255] conserved hypothetical protein TIGR00255 |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGCACA GCATGACTGC CTTCGCCCGA GTAGAGCGGG CTGGCGCCCA GGGCACATTG AGCTGGGAGC TGCGCTCGGT CAATCATCGT TACCTTGAGC CTCACCTGCG CCTGCCTGAA TCGTTCCGCG ATCTGGAGGG CGCGATTCGC GAAGCGCTGC GCCAGGGTCT GTCGCGTGGC AAGGTTGAAT GCACCTTGCG CTTTGTCGAA GAGACCGCCG GCAAGCCGCT GCAGGTTGAT CGCGAGCGTG CGGGTCAATT GATCGCCGCC GCCGAATCGG TTGCTGGCTT GATCAAGCAG CCTGCCGCGC TGAACCCGCT TGAGGTGCTG GCGTGGCCGG GCGTTCTGGT CGCCGATGCC AGCGACCCGC AAGTGTTGAA CACCGAGGCG CTGACGCTGT TCAATGACGC GCTGAGCGAA TTGAAACTGG GGCGGGGCCG TGAAGGTGCA GACCTGGCCA GGTTGCTGGA TGAGCGCCTG TCTTCCATTG TCGGGGAAGT GGCCACTTTG CGCACGCTGG TCCCGCAGAT GCTGGCCGCT CAGCGCCAGA AAGTGCTCGA TCGCTTTGCC GACATGAAAG CCGAGCTTGA TCCTCAGCGG CTGGAGCAGG AGATGGTTCT GCTGGCACAG AAAAGCGACG TGGCCGAAGA GCTGGACCGC CTCAGCACGC ATGTCACCGA AGTGCGCCGT GTGCTCAAGG CCGGTGGTCA GGCGGGTCGT CGTCTTGATT TCCTGATGCA AGAGCTTAAC CGCGAAGCGA ATACACTGGG CTCCAAGGCC TTTGACCCAC GCAGCACGCA GGCCGCCGTC AACCTTAAAG TGTTGATCGA GCAGATGCGT GAGCAAGTGC AGAATATTGA GTAA
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Protein sequence | MVHSMTAFAR VERAGAQGTL SWELRSVNHR YLEPHLRLPE SFRDLEGAIR EALRQGLSRG KVECTLRFVE ETAGKPLQVD RERAGQLIAA AESVAGLIKQ PAALNPLEVL AWPGVLVADA SDPQVLNTEA LTLFNDALSE LKLGRGREGA DLARLLDERL SSIVGEVATL RTLVPQMLAA QRQKVLDRFA DMKAELDPQR LEQEMVLLAQ KSDVAEELDR LSTHVTEVRR VLKAGGQAGR RLDFLMQELN REANTLGSKA FDPRSTQAAV NLKVLIEQMR EQVQNIE
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