Gene PSPTO_0076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0076 
Symbol 
ID1181684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp98040 
End bp98903 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content62% 
IMG OID637391453 
Producthypothetical protein 
Protein accessionNP_789935 
Protein GI28867316 
COG category[S] Function unknown 
COG ID[COG1561] Uncharacterized stress-induced protein 
TIGRFAM ID[TIGR00255] conserved hypothetical protein TIGR00255 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGCACA GCATGACTGC CTTCGCCCGA GTAGAGCGGG CTGGCGCCCA GGGCACATTG 
AGCTGGGAGC TGCGCTCGGT CAATCATCGT TACCTTGAGC CTCACCTGCG CCTGCCTGAA
TCGTTCCGCG ATCTGGAGGG CGCGATTCGC GAAGCGCTGC GCCAGGGTCT GTCGCGTGGC
AAGGTTGAAT GCACCTTGCG CTTTGTCGAA GAGACCGCCG GCAAGCCGCT GCAGGTTGAT
CGCGAGCGTG CGGGTCAATT GATCGCCGCC GCCGAATCGG TTGCTGGCTT GATCAAGCAG
CCTGCCGCGC TGAACCCGCT TGAGGTGCTG GCGTGGCCGG GCGTTCTGGT CGCCGATGCC
AGCGACCCGC AAGTGTTGAA CACCGAGGCG CTGACGCTGT TCAATGACGC GCTGAGCGAA
TTGAAACTGG GGCGGGGCCG TGAAGGTGCA GACCTGGCCA GGTTGCTGGA TGAGCGCCTG
TCTTCCATTG TCGGGGAAGT GGCCACTTTG CGCACGCTGG TCCCGCAGAT GCTGGCCGCT
CAGCGCCAGA AAGTGCTCGA TCGCTTTGCC GACATGAAAG CCGAGCTTGA TCCTCAGCGG
CTGGAGCAGG AGATGGTTCT GCTGGCACAG AAAAGCGACG TGGCCGAAGA GCTGGACCGC
CTCAGCACGC ATGTCACCGA AGTGCGCCGT GTGCTCAAGG CCGGTGGTCA GGCGGGTCGT
CGTCTTGATT TCCTGATGCA AGAGCTTAAC CGCGAAGCGA ATACACTGGG CTCCAAGGCC
TTTGACCCAC GCAGCACGCA GGCCGCCGTC AACCTTAAAG TGTTGATCGA GCAGATGCGT
GAGCAAGTGC AGAATATTGA GTAA
 
Protein sequence
MVHSMTAFAR VERAGAQGTL SWELRSVNHR YLEPHLRLPE SFRDLEGAIR EALRQGLSRG 
KVECTLRFVE ETAGKPLQVD RERAGQLIAA AESVAGLIKQ PAALNPLEVL AWPGVLVADA
SDPQVLNTEA LTLFNDALSE LKLGRGREGA DLARLLDERL SSIVGEVATL RTLVPQMLAA
QRQKVLDRFA DMKAELDPQR LEQEMVLLAQ KSDVAEELDR LSTHVTEVRR VLKAGGQAGR
RLDFLMQELN REANTLGSKA FDPRSTQAAV NLKVLIEQMR EQVQNIE