| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0073 |
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| Symbol | spoT |
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| ID | 1181681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 94805 |
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| End bp | 96910 |
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| Gene Length | 2106 bp |
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| Protein Length | 701 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637391450 |
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| Product | guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase |
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| Protein accession | NP_789932 |
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| Protein GI | 28867313 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.977893 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCCGAGCA TAGACGCCCT CGCCGACAGA CTGTCGGCCT ACCTCGGTAA GGACCAGGTC
AATCTGGTCC GCCGAGCGTA TTTCTACGCC GAACAAGCCC ACGATGGCCA GCGCCGTCGC
AGCGGTGAAG CCTACGTCAC CCATCCTCTT GCGGTAGCCA ATATCCTTGC TGACATGCAC
ATGGACCATC AGAGCCTGAT GGCTGCGATG CTGCATGACG TCATCGAAGA CACCGGTATT
GCCAAGGAAG CGCTCAGCGC GCAGTTTGGC GAAACCGTCG CGGAACTGGT CGACGGGGTC
AGCAAACTGA CCCAGATGAA CTTCGAGACC AAAGCCGAAG CTCAGGCCGA AAACTTCCAG
AAAATGGCCA TGGCGATGGC GCGGGACATC CGCGTGATTC TGGTCAAGCT CGCCGACCGC
CTGCACAACA TGCGCACACT GGAAGTCCTG TCCGGTGAAA AGCGCCGCCG CATCGCCAAG
GAAACCCTCG AAATCTATGC CCCCATCGCC AATCGGCTGG GCATGCACAG TGTGCGCATC
GAATTTGAAG ACCTGGGTTT CAAGGCCATG TACCCGATGC GCTCCTCGCG AATCAACCAG
GCGGTCAAGC GCGCCAGGGG CAATCGCAAG GAGCTGGTCA ACAAGATCGA AGAGTCCCTG
AGCCATTGCC TTGCGGTGGA TGGCATCGAA GGCGACGTCA GCGGGCGGCA GAAACACCTC
TACGGCATCT ACAAGAAGAT GCGCGGCAAG CGCCGGGCCT TCAACGAGAT CATGGACGTT
TACGCGTTCC GCATCATCGT CGACAAGGTC GATACCTGTT ATCGCGTGCT GGGCGCTGTA
CATAATCTGT ACAAGCCGCT GCCCGGCCGA TTCAAGGATT ACATCGCGAT CCCCAAGGCC
AACGGCTACC AGTCGTTGCA TACCACGCTG TTCGGCATGC ACGGCGTACC GATCGAAATC
CAGATTCGCA CACGCGAAAT GGAAGAGATG GCCAATAACG GCATCGCTGC GCACTGGCTG
TACAAATCCA GTGATGACGA GCAGCCCAAG GGCACTCACG CCCGCGCCCG GCAGTGGGTC
AAGGGCGTGC TGGAAATGCA GCAGCGCGCG GGCAACTCCC TGGAGTTCAT CGAGAGCGTC
AAGATCGACC TGTTCCCGGA CGAGGTCTAC GTTTTCACGC CCAAGGGCCG GATCATGGAG
CTGCCCAAAG GCTCCACGGC AGTGGATTTT GCCTATGCAG TGCATACCGA TGTCGGCAAC
AGCTGCATTG CCTGTCGCAT CAACCGTCGA CTGGCGCCAT TGTCCGAGCC GCTGCAGAGC
GGCTCCACGG TCGAGATTGT CAGCGCCCCC GGCGCACGTC CGAACCCGGC ATGGCTGAAC
TTCGTCGTCA CCGGCAAGGC ACGTACCCAT ATTCGCCACG CGCTCAAGCT GCAACGCCGC
TCCGAGTCGA TCAACCTTGG CGAGCGCCTG CTCAACAAGG TGCTTAACGG CTTTGAATGC
AGCCTGGACA AGGTCACGCC AGAGCGCATT CAACTGGTGC TGAATGAATA TCGGGTCGAG
GTGCTGGAAG ACCTGCTCGA AGACATCGGC CTGGGCAATC GCATGGCCTA TGTCGTCGCC
CGCCGCTTGC TGGGCGAAGG CGAGCAACTG CCAAGCCCGG AAGGCCCGCT GGCGATTCGC
GGCACCGAAG GTCTGGTACT CAGCTACGCC AAATGCTGTA CGCCGATCCC GGGCGACCCG
ATTGTCGGCC ATTTGTCTGC GGGCAAGGGC ATGGTCGTGC ACCTGGATAA CTGCCGTAAT
ATCAGCGAAA TCCGCCACAA CCCGGAAAAA TGCATCCAGC TTTCCTGGGC CAAGGACGTC
ACCGGCGAAT TCAATGTCGA GCTGCGTGTC GAGCTAGAGC ACCAGCGCGG TCTGATCGCC
TTGCTGGCCA GCAGCGTCAA CGCAGCCGAT GGCAATATCG AAAAAATCAG TATGGACGAA
CGCGATGGTC GCATCAGCGT GGTCCAACTG GTGGTCAGTG TGCACGACCG CGTGCACCTG
GCCCGCGTGA TCAAGAAACT GCGCGCCTTG ACCGGTGTCA CACGCATCAC CCGGATGCGC
GCGTAG
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| Protein sequence | MPSIDALADR LSAYLGKDQV NLVRRAYFYA EQAHDGQRRR SGEAYVTHPL AVANILADMH
MDHQSLMAAM LHDVIEDTGI AKEALSAQFG ETVAELVDGV SKLTQMNFET KAEAQAENFQ
KMAMAMARDI RVILVKLADR LHNMRTLEVL SGEKRRRIAK ETLEIYAPIA NRLGMHSVRI
EFEDLGFKAM YPMRSSRINQ AVKRARGNRK ELVNKIEESL SHCLAVDGIE GDVSGRQKHL
YGIYKKMRGK RRAFNEIMDV YAFRIIVDKV DTCYRVLGAV HNLYKPLPGR FKDYIAIPKA
NGYQSLHTTL FGMHGVPIEI QIRTREMEEM ANNGIAAHWL YKSSDDEQPK GTHARARQWV
KGVLEMQQRA GNSLEFIESV KIDLFPDEVY VFTPKGRIME LPKGSTAVDF AYAVHTDVGN
SCIACRINRR LAPLSEPLQS GSTVEIVSAP GARPNPAWLN FVVTGKARTH IRHALKLQRR
SESINLGERL LNKVLNGFEC SLDKVTPERI QLVLNEYRVE VLEDLLEDIG LGNRMAYVVA
RRLLGEGEQL PSPEGPLAIR GTEGLVLSYA KCCTPIPGDP IVGHLSAGKG MVVHLDNCRN
ISEIRHNPEK CIQLSWAKDV TGEFNVELRV ELEHQRGLIA LLASSVNAAD GNIEKISMDE
RDGRISVVQL VVSVHDRVHL ARVIKKLRAL TGVTRITRMR A
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