| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0069 |
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| Symbol | exbB-1 |
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| ID | 1181677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 91543 |
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| End bp | 92499 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637391446 |
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| Product | TonB system transport protein ExbB |
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| Protein accession | NP_789928 |
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| Protein GI | 28867309 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0811] Biopolymer transport proteins |
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| TIGRFAM ID | [TIGR02797] tonB-system energizer ExbB |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACACGCA TTCAATCAAT CGCTTCGCCT ACCAAGCTGC CTCGCCTGCC TCGTGCATGG
CGTGGTATTG CAGCCCTTGT CTTGAGCCTG ATGTTCGTGC CCGTGGCACT CGCGGATCAA
TCGGCGCCAG CGACCACCCC CCCTGCAGCC TCCGCCGCTC CAGCGGCAGC GGCTCCTGTT
GCACCTGACG CCGCCGCACC GGTTCAGGCG CTGGAGCCAG TGGCTGAAGA CAACAGCCTG
GGCATGGCAC ATGACCTGTC GCCGTGGGGC ATGTATCAGA ACGCCGACAT CGTCGTGAAG
ATCGTCATGA TCGGGCTGGC CATCGCCTCG ATCATTACGT GGACCATCTG GATCTCCAAG
GGTTTCGAGT TGCTGGGCGC CAAGCGCCGG TTGCGCGGAG AAATCGTCAA CCTGAAAAAA
GCCCGCTCCC TGACAGAAGC CAGCGCAACC GCCAGCAAGG AAGGCACGCT TGCCCACCTG
CTGGTGCACG ACGCGCTTGA AGAAATGCGC CTTTCGGCCA ACAGCCGTGA ACGCGAAGGG
ATCAAGGAGC GTGTCAGCTT CCGCCTCGAG CGCCTGGTAG CAGCCTGTGG CCGTAACATG
AGCATGGGCA CCGGCGTGCT GGCAACCATC GGTTCTACGG CGCCGTTCGT GGGTCTGTTC
GGCACCGTGT GGGGCATCAT GAACAGCTTC ATCGGCATCG CCAAAACCCA GACCACCAAC
CTTGCCGTCG TCGCCCCCGG CATCGCCGAG GCCCTGCTGG CCACGGCGCT GGGTCTGGTT
GCCGCGATTC CTGCGGTGGT GATCTACAAC GTGTTTGCGC GCTCCATCGC CGGTTACAAG
GCCCAGGTCT CCGACGCCTC GGCACACGTG CTGTTGCTGG TCAGCCGCGA TCTGGATCAT
CTGCCAGAGC CTGCCGAACG CAATCAACAA CAACCGCACA TGGTCAAGGT GGGCTAA
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| Protein sequence | MTRIQSIASP TKLPRLPRAW RGIAALVLSL MFVPVALADQ SAPATTPPAA SAAPAAAAPV
APDAAAPVQA LEPVAEDNSL GMAHDLSPWG MYQNADIVVK IVMIGLAIAS IITWTIWISK
GFELLGAKRR LRGEIVNLKK ARSLTEASAT ASKEGTLAHL LVHDALEEMR LSANSREREG
IKERVSFRLE RLVAACGRNM SMGTGVLATI GSTAPFVGLF GTVWGIMNSF IGIAKTQTTN
LAVVAPGIAE ALLATALGLV AAIPAVVIYN VFARSIAGYK AQVSDASAHV LLLVSRDLDH
LPEPAERNQQ QPHMVKVG
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