| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0067 |
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| Symbol | tonB-1 |
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| ID | 1181675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 90371 |
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| End bp | 91117 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637391444 |
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| Product | tonB protein |
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| Protein accession | NP_789926 |
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| Protein GI | 28867307 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATCAGTA CGCGCCAGAA ACTGACGCGC TATAGCGGTA GTCTGTTGTT GGTGCTGGCC
GTGCACGCTA TCGCAATCAT TGTTGCCGTT CGCTGGCCCG CCTCTCAGGC GATCGAGTTG
CCGCCGGCAG CGATGATGGT CGAGCTTGCG CCATTGCCCG AGCCAGCGCC GCCGCCACCG
CCAAAGGTTG TTCAGCCGCC GCAGCCGCCC GCGCCCGAAG AGCAGGTTCC CATGCCGGAA
GTCGCGCAAG CGCCGAAGCC GGAAATCGTG GTGCCCAAGA AGGTCGAGAA GCCCAAGCCA
AAACCGCAGC CGCCCAAGCC GCAGAAGAAG CCTGAGCCAC CTCAGGAAAA GCCTGCTGAC
GAAAAGCCGG TCGATACTCC GCCGAGTACA GCCAAACCGG AAAAATCGGC TGCTCCGGCA
CCAGCGCCTA CGCCTTCGCC GCCCAGCACC GCATTGCCTA GCTGGCAGGG CGACCTGCTG
AGTCATCTGG GCAAGTACAA GAAGTATCCC GAAGACGCTC GCCGTCGCGG TATGCAGGGT
GTTGCCCGTT TGCGGTTCGT CGTGGACGCT GATGGCAACG TACTGTCCTA CTCGATTGCC
AACAGCTCGG GCAGCCCGGC ACTGGATCGG GCAACGATGG AAATGATCCG TCGTGCGCAA
CCATTGCCCA AGCCGCCGAA GGAAATTCTC AACAACGGCA CCATTGAAAT CCTCGCACCG
TTCGTTTATT CGCTGGATAA ACGCTGA
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| Protein sequence | MISTRQKLTR YSGSLLLVLA VHAIAIIVAV RWPASQAIEL PPAAMMVELA PLPEPAPPPP
PKVVQPPQPP APEEQVPMPE VAQAPKPEIV VPKKVEKPKP KPQPPKPQKK PEPPQEKPAD
EKPVDTPPST AKPEKSAAPA PAPTPSPPST ALPSWQGDLL SHLGKYKKYP EDARRRGMQG
VARLRFVVDA DGNVLSYSIA NSSGSPALDR ATMEMIRRAQ PLPKPPKEIL NNGTIEILAP
FVYSLDKR
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