Gene PSPTO_0067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0067 
SymboltonB-1 
ID1181675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp90371 
End bp91117 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content61% 
IMG OID637391444 
ProducttonB protein 
Protein accessionNP_789926 
Protein GI28867307 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0810] Periplasmic protein TonB, links inner and outer membranes 
TIGRFAM ID[TIGR01352] TonB family C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAGTA CGCGCCAGAA ACTGACGCGC TATAGCGGTA GTCTGTTGTT GGTGCTGGCC 
GTGCACGCTA TCGCAATCAT TGTTGCCGTT CGCTGGCCCG CCTCTCAGGC GATCGAGTTG
CCGCCGGCAG CGATGATGGT CGAGCTTGCG CCATTGCCCG AGCCAGCGCC GCCGCCACCG
CCAAAGGTTG TTCAGCCGCC GCAGCCGCCC GCGCCCGAAG AGCAGGTTCC CATGCCGGAA
GTCGCGCAAG CGCCGAAGCC GGAAATCGTG GTGCCCAAGA AGGTCGAGAA GCCCAAGCCA
AAACCGCAGC CGCCCAAGCC GCAGAAGAAG CCTGAGCCAC CTCAGGAAAA GCCTGCTGAC
GAAAAGCCGG TCGATACTCC GCCGAGTACA GCCAAACCGG AAAAATCGGC TGCTCCGGCA
CCAGCGCCTA CGCCTTCGCC GCCCAGCACC GCATTGCCTA GCTGGCAGGG CGACCTGCTG
AGTCATCTGG GCAAGTACAA GAAGTATCCC GAAGACGCTC GCCGTCGCGG TATGCAGGGT
GTTGCCCGTT TGCGGTTCGT CGTGGACGCT GATGGCAACG TACTGTCCTA CTCGATTGCC
AACAGCTCGG GCAGCCCGGC ACTGGATCGG GCAACGATGG AAATGATCCG TCGTGCGCAA
CCATTGCCCA AGCCGCCGAA GGAAATTCTC AACAACGGCA CCATTGAAAT CCTCGCACCG
TTCGTTTATT CGCTGGATAA ACGCTGA
 
Protein sequence
MISTRQKLTR YSGSLLLVLA VHAIAIIVAV RWPASQAIEL PPAAMMVELA PLPEPAPPPP 
PKVVQPPQPP APEEQVPMPE VAQAPKPEIV VPKKVEKPKP KPQPPKPQKK PEPPQEKPAD
EKPVDTPPST AKPEKSAAPA PAPTPSPPST ALPSWQGDLL SHLGKYKKYP EDARRRGMQG
VARLRFVVDA DGNVLSYSIA NSSGSPALDR ATMEMIRRAQ PLPKPPKEIL NNGTIEILAP
FVYSLDKR