Gene PSPTO_0065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0065 
SymbolrecG 
ID1181673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp87268 
End bp89343 
Gene Length2076 bp 
Protein Length691 aa 
Translation table11 
GC content62% 
IMG OID637391442 
ProductATP-dependent DNA helicase RecG 
Protein accessionNP_789924 
Protein GI28867305 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG1200] RecG-like helicase 
TIGRFAM ID[TIGR00643] ATP-dependent DNA helicase RecG 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAGC TTTCCAGGGT ATCGGTCACG GCACTCAAAG GTGTCGGTGA AGCGATGGCA 
GAAAAGCTGG CCAAGGTTGG TCTGGAAAAT CTGCAGGACG TGTTGTTTCA TCTACCGCTG
CGCTATCAGG ACCGGACTCG CATCGTACCT ATAGGTGCGT TGAGCCCCGG TCAGGATGCG
GTGATCGAAG GCGTCGTGAG CGGTGCCGAT GTGGTGATGG GCAAGCGGCG CAGCCTGTTG
GTGCGACTTG GCGACGGCAC CGGTGTCGTC AGTCTGCGTT TTTACCACTT CAGCAATGCC
CAGAAAGAAA GCATGAAGCG CGGCACGCAC CTGCGTTGTT TCGGTGAAGC GCGCCCCGGT
GCTTCCGGGC TGGAAATCTA CCACCCGGAA TACCGTGCGA TCACCGGCGA TGAGCCGCCA
CCGGTCGAGC AGACCCTCAC GCCGATCTAC CCCACGACCG AAGGCCTCAC TCAGCAGCGT
CTGCGCCAGT TGTGTCAGCA GAGCCTGGCG ATGCTTGGCC CGAAAAGCCT GCCGGACTGG
CTGCCGGAAG AACTGGCCCG CGACTATCAA CTGGCCCCGC TGGATGACGC GATTCGCTAC
CTGCATCATC CACCCGCTGA CGCCGACGTG GACGAACTGG CGCTCGGGCA TCACTGGGCG
CAGCACCGTC TGGCCTTTGA AGAGCTGCTG ACCCATCAGC TTTCTCAGCA ACGGCTGCGC
GAAAGCCTGC GTTCACAGCG TGCACCCGCA CTGCCCGTTG CGAAAAAACT GCCGAAACAA
TTTCTCGCCA ACCTGGGTTT TGCGCCCACT GGCGCGCAGC AGCGTGTCGG CAAGGAAGTG
GCCTACGACC TGAGCCAGCC CGAACCGATG CTGCGCTTGA TTCAGGGTGA TGTCGGTTCT
GGCAAGACCG TGGTCGCCGC ATTGGCTGCG CTGCAGGCAC TGGAAGCGGG TTATCAAGTG
GCGCTGATGG CGCCGACCGA GATTCTGGCC GAGCAGCATT ACATCAACTT TCAGCGCTGG
CTCGAACCAC TTGGCGTGGA TGTGGCGTGG CTTGCCGGCA AGCTCAAGGG TAAAGCGCGT
GTGACCTCGC TTGAGCAGAT TGCTACGGGC ACCCCCATGG TGGTCGGCAC TCACGCCTTG
TTTCAGGACG AAGTGCAGTT CAAGAATCTG GCACTGGTGA TCATCGACGA GCAGCACCGA
TTCGGTGTTC AGCAGCGTCT GGCGCTGCGC AAGAAGGGTA TTGGCGGCCT GATGTGCCCA
CACCAGTTGA TCATGACTGC CACGCCCATC CCGCGCACGC TGGCCATGAG CGCCTACGCT
GACCTGGACA CCTCGATTCT CGACGAACTG CCGCCCGGCC GAACGCCGGT CAATACGGTG
CTGGTCGCCG ACAGCCGCCG CCTGGAAGTC GTCGAACGCG TCCGCGCCGC CTGCGCCGAG
GGGCGCCAGG CGTATTGGGT CTGCACGCTG ATCGAAGAGT CCGAAGAACT GACCTGCAAG
GCTGCTGAAA CGACGTACGA AGAACTCACC AGTGCTCTGG GTGAGGTTCG CGTCGGGTTG
ATCCACGGGC GCATGAAGCA TGCAGAAAAA GCCGCGATCA TGGCTGAATT CAAGCAGGGC
GCGCTGCAAT TGCTGGTGGC GACCACGGTG ATCGAGGTCG GTGTCGACGT GCCGAATTCC
AGCCTGATGA TCATCGAAAA CCCCGAGCGT CTCGGCTTGG CTCAACTGCA CCAGTTGCGT
GGACGCGTCG GACGCGGCAG TGCCGTCAGT CACTGCGTGT TGCTGTATCA CCCGCCACTT
TCACAGATCG GGCGGCAACG GCTGGGCATC ATGCGCGAGA CCAATGACGG TTTTATCATC
GCGGAAAAAG ACCTCGAACT GCGCGGTCCT GGTGAAATGC TCGGAACCCG ACAAACGGGC
CTGCTGCAAT TCAAGGTCGC CGACCTGATG CGCGACGCCG ACCTGCTCCC GGCCGTACGC
GACGCAGCGC AGGCGCTGCT CGAGCGTTGG CCGCAACATG TCAGCCCGCT ACTGGACCGA
TGGCTTCGTC ATGGCCAGCA GTATGGCCAG GTGTGA
 
Protein sequence
MSELSRVSVT ALKGVGEAMA EKLAKVGLEN LQDVLFHLPL RYQDRTRIVP IGALSPGQDA 
VIEGVVSGAD VVMGKRRSLL VRLGDGTGVV SLRFYHFSNA QKESMKRGTH LRCFGEARPG
ASGLEIYHPE YRAITGDEPP PVEQTLTPIY PTTEGLTQQR LRQLCQQSLA MLGPKSLPDW
LPEELARDYQ LAPLDDAIRY LHHPPADADV DELALGHHWA QHRLAFEELL THQLSQQRLR
ESLRSQRAPA LPVAKKLPKQ FLANLGFAPT GAQQRVGKEV AYDLSQPEPM LRLIQGDVGS
GKTVVAALAA LQALEAGYQV ALMAPTEILA EQHYINFQRW LEPLGVDVAW LAGKLKGKAR
VTSLEQIATG TPMVVGTHAL FQDEVQFKNL ALVIIDEQHR FGVQQRLALR KKGIGGLMCP
HQLIMTATPI PRTLAMSAYA DLDTSILDEL PPGRTPVNTV LVADSRRLEV VERVRAACAE
GRQAYWVCTL IEESEELTCK AAETTYEELT SALGEVRVGL IHGRMKHAEK AAIMAEFKQG
ALQLLVATTV IEVGVDVPNS SLMIIENPER LGLAQLHQLR GRVGRGSAVS HCVLLYHPPL
SQIGRQRLGI MRETNDGFII AEKDLELRGP GEMLGTRQTG LLQFKVADLM RDADLLPAVR
DAAQALLERW PQHVSPLLDR WLRHGQQYGQ V